Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 EP400NL-214ENST00000641289 2402 ntBASIC15.96■□□□□ 0.15
TRAV2A0A0B4J234 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.14
TRAV2A0A0B4J234 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.96■□□□□ 0.14
TRAV2A0A0B4J234 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 MIR6084-201ENST00000622012 110 ntBASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV2A0A0B4J234 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV2A0A0B4J234 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV2A0A0B4J234 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV2A0A0B4J234 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TRAV2A0A0B4J234 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV2A0A0B4J234 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
TRAV2A0A0B4J234 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV2A0A0B4J234 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV2A0A0B4J234 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
TRAV2A0A0B4J234 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV2A0A0B4J234 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV2A0A0B4J234 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV2A0A0B4J234 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV2A0A0B4J234 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
TRAV2A0A0B4J234 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV2A0A0B4J234 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV2A0A0B4J234 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV2A0A0B4J234 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV2A0A0B4J234 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV2A0A0B4J234 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV2A0A0B4J234 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV2A0A0B4J234 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 TUB-203ENST00000534099 1759 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 AL024507.2-201ENST00000606070 2574 ntBASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 AC019069.1-201ENST00000610008 1333 ntBASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV2A0A0B4J234 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV2A0A0B4J234 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV2A0A0B4J234 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV2A0A0B4J234 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV2A0A0B4J234 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV2A0A0B4J234 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV2A0A0B4J234 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV2A0A0B4J234 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV2A0A0B4J234 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV2A0A0B4J234 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV2A0A0B4J234 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV2A0A0B4J234 AC244015.2-201ENST00000616358 1861 ntBASIC15.92■□□□□ 0.14
TRAV2A0A0B4J234 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV2A0A0B4J234 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV2A0A0B4J234 AC003102.1-202ENST00000563394 1796 ntBASIC15.92■□□□□ 0.14
TRAV2A0A0B4J234 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV2A0A0B4J234 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV2A0A0B4J234 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TRAV2A0A0B4J234 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV2A0A0B4J234 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV2A0A0B4J234 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV2A0A0B4J234 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAV2A0A0B4J234 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV2A0A0B4J234 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV2A0A0B4J234 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms