Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-1A0A0A6YYK1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV8-1A0A0A6YYK1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRAV8-1A0A0A6YYK1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-1A0A0A6YYK1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-1A0A0A6YYK1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-1A0A0A6YYK1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-1A0A0A6YYK1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-1A0A0A6YYK1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV8-1A0A0A6YYK1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRAV8-1A0A0A6YYK1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-1A0A0A6YYK1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-1A0A0A6YYK1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-1A0A0A6YYK1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-1A0A0A6YYK1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-1A0A0A6YYK1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV8-1A0A0A6YYK1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRAV8-1A0A0A6YYK1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-1A0A0A6YYK1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV8-1A0A0A6YYK1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-1A0A0A6YYK1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-1A0A0A6YYK1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-1A0A0A6YYK1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-1A0A0A6YYK1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV8-1A0A0A6YYK1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRAV8-1A0A0A6YYK1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV8-1A0A0A6YYK1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-1A0A0A6YYK1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
TRAV8-1A0A0A6YYK1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-1A0A0A6YYK1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-1A0A0A6YYK1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRAV8-1A0A0A6YYK1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-1A0A0A6YYK1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV8-1A0A0A6YYK1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAV8-1A0A0A6YYK1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV8-1A0A0A6YYK1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV8-1A0A0A6YYK1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV8-1A0A0A6YYK1 PCDHAC2-203ENST00000615316 3011 ntBASIC16.02■□□□□ 0.15
TRAV8-1A0A0A6YYK1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRAV8-1A0A0A6YYK1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-1A0A0A6YYK1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-1A0A0A6YYK1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16■□□□□ 0.15
TRAV8-1A0A0A6YYK1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-1A0A0A6YYK1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRAV8-1A0A0A6YYK1 AL391422.3-201ENST00000603791 2761 ntBASIC16■□□□□ 0.15
TRAV8-1A0A0A6YYK1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-1A0A0A6YYK1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
TRAV8-1A0A0A6YYK1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-1A0A0A6YYK1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-1A0A0A6YYK1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16■□□□□ 0.15
TRAV8-1A0A0A6YYK1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
TRAV8-1A0A0A6YYK1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16■□□□□ 0.15
TRAV8-1A0A0A6YYK1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-1A0A0A6YYK1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16■□□□□ 0.15
TRAV8-1A0A0A6YYK1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-1A0A0A6YYK1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-1A0A0A6YYK1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TRAV8-1A0A0A6YYK1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16■□□□□ 0.15
TRAV8-1A0A0A6YYK1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRAV8-1A0A0A6YYK1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV8-1A0A0A6YYK1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-1A0A0A6YYK1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-1A0A0A6YYK1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-1A0A0A6YYK1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-1A0A0A6YYK1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-1A0A0A6YYK1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-1A0A0A6YYK1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV8-1A0A0A6YYK1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-1A0A0A6YYK1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-1A0A0A6YYK1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRAV8-1A0A0A6YYK1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 275.9 ms