Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MEP1A-202ENST00000611727 2971 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 ZNF330-201ENST00000262990 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 ZNF540-210ENST00000592533 3147 ntAPPRIS P3 TSL 2 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 TP53TG3E-202ENST00000623491 2026 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 FBXO9-202ENST00000323557 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 PDYN-203ENST00000540134 2472 ntAPPRIS P1 TSL 4 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 ZHX1-206ENST00000522655 3357 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 FAM19A2-201ENST00000416284 4128 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 YY1AP1-209ENST00000368330 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 MGAT5B-203ENST00000428789 4053 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 ERMARD-204ENST00000392095 1908 ntTSL 2 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 FAM221A-201ENST00000344962 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 CARD14-201ENST00000344227 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 GABRB2-204ENST00000517547 1349 ntTSL 2 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 LINC00319-202ENST00000448049 3507 ntTSL 5 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 PITX2-202ENST00000354925 3359 ntAPPRIS ALT1 TSL 2 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 ECD-201ENST00000372979 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 KBTBD4-209ENST00000533290 3079 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 KIF24-202ENST00000402558 6131 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 MAST4-204ENST00000405643 7713 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 ERC2-IT1-201ENST00000629461 2177 ntBASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 PFKM-202ENST00000340802 3176 ntTSL 2 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 ZNF222-202ENST00000391960 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 MTA2-202ENST00000524902 2577 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 C11orf54-214ENST00000540113 2442 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 AC124303.2-201ENST00000623883 1449 ntBASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 GOLGA6L22-203ENST00000620691 3991 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 PRM3-201ENST00000327157 424 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 FGF1-203ENST00000360966 695 ntTSL 2 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 GBP6-201ENST00000370456 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 EXOSC1-202ENST00000370885 718 ntTSL 3 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 APOO-201ENST00000379226 1118 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 CLCP2-201ENST00000392050 421 ntBASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 CYTOR-208ENST00000419680 675 ntTSL 5 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 AL592166.1-202ENST00000428791 580 ntTSL 3 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 BOLL-205ENST00000433157 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 AL357992.1-201ENST00000433442 130 ntTSL 2 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 PCOTH-203ENST00000435039 542 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 AL390730.2-201ENST00000441773 674 ntTSL 2 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 CYTOR-211ENST00000455131 733 ntTSL 5 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 C9orf147-203ENST00000460965 446 ntTSL 3 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 HINT1P1-201ENST00000464866 378 ntBASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 RN7SL40P-201ENST00000474689 342 ntBASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 DLEU1-219ENST00000476738 838 ntTSL 5 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 OR6W1P-201ENST00000490285 1098 ntBASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 OR6W1P-202ENST00000496192 1100 ntBASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 AC074134.1-201ENST00000503901 1108 ntBASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 AC139713.1-201ENST00000515019 321 ntBASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 SNORA73.4-201ENST00000517281 115 ntBASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 AP003057.1-201ENST00000526512 1245 ntBASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 EIF1AD-206ENST00000527249 889 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 PINLYP-204ENST00000562365 706 ntTSL 2 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 ARL16-207ENST00000573392 869 ntTSL 3 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 RN7SL275P-201ENST00000582762 335 ntBASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 ZNF177-203ENST00000590616 612 ntTSL 3 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 AC024288.1-201ENST00000613682 210 ntBASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 AC239859.5-201ENST00000614100 1232 ntBASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 AC012048.1-201ENST00000622980 595 ntBASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 SLC16A7-203ENST00000547379 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 VASH2-206ENST00000366968 4224 ntTSL 2 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 AC090124.3-201ENST00000265458 1673 ntBASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 Z97206.1-201ENST00000404930 1673 ntBASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 AC023830.2-201ENST00000563704 1662 ntBASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 SRGAP2C-202ENST00000367123 7204 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 LHX4-201ENST00000263726 5820 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 PSMD10-201ENST00000217958 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 AL121956.1-201ENST00000444219 1548 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 FAM153B-201ENST00000253490 1913 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 LRRC46-201ENST00000269025 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 MPP4-205ENST00000409474 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 EEF1A1-201ENST00000309268 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 GPR176-202ENST00000543580 1755 ntTSL 2 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 PPP6R3-201ENST00000265636 4794 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 REV3L-202ENST00000368802 10701 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 CHRM2-204ENST00000453373 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 SSU72-202ENST00000359060 4176 ntTSL 2 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 NEK1-206ENST00000510533 5377 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 ZMIZ2-201ENST00000265346 3643 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
NPIPA3F8WFD2 ITGAX-203ENST00000562522 3990 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
NPIPA3F8WFD2 KCNE4-201ENST00000281830 3291 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NPIPA3F8WFD2 ZAN-204ENST00000546292 8378 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
NPIPA3F8WFD2 MAGED1-202ENST00000375695 2875 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
NPIPA3F8WFD2 CALCOCO1-201ENST00000262059 5866 ntAPPRIS ALT1 TSL 2 BASIC10.1□□□□□ -0.79
NPIPA3F8WFD2 PDK2-216ENST00000614357 2493 ntTSL 5 BASIC10.1□□□□□ -0.79
NPIPA3F8WFD2 SPIB-205ENST00000595883 3791 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
NPIPA3F8WFD2 IGSF5-201ENST00000380588 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NPIPA3F8WFD2 REN-201ENST00000272190 1447 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
NPIPA3F8WFD2 AC005324.4-204ENST00000413242 4262 ntAPPRIS P5 TSL 2 BASIC10.1□□□□□ -0.79
NPIPA3F8WFD2 PAX3-204ENST00000350526 3610 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
NPIPA3F8WFD2 AC096636.1-201ENST00000625140 3618 ntBASIC10.1□□□□□ -0.79
NPIPA3F8WFD2 AL031283.1-201ENST00000427824 5178 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
NPIPA3F8WFD2 KIAA1683-207ENST00000600359 3871 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
NPIPA3F8WFD2 MET-201ENST00000318493 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
NPIPA3F8WFD2 PRM1-201ENST00000312511 424 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NPIPA3F8WFD2 OR6B3-201ENST00000319423 996 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
NPIPA3F8WFD2 KRTAP9-4-201ENST00000334109 967 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
NPIPA3F8WFD2 SERF2-202ENST00000339624 506 ntTSL 2 BASIC10.1□□□□□ -0.79
NPIPA3F8WFD2 DAAM2-203ENST00000405961 829 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
NPIPA3F8WFD2 LINC01297-201ENST00000438574 519 ntTSL 3 BASIC10.1□□□□□ -0.79
NPIPA3F8WFD2 AC106806.1-201ENST00000466718 561 ntBASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 1335.2 ms