Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.756e-6■□□□□ 8.9
DDX3XO00571 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.44■■□□□ 1.824e-14■□□□□ 8.9
DDX3XO00571 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.43■■□□□ 1.824e-14■□□□□ 8.9
DDX3XO00571 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.223e-40■□□□□ 8.9
DDX3XO00571 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.414e-14■□□□□ 8.9
DDX3XO00571 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.023e-40■□□□□ 8.9
DDX3XO00571 RBM25-202ENST00000525161 541 ntTSL 412.16□□□□□ -0.464e-14■□□□□ 8.9
DDX3XO00571 GSPT1-201ENST00000420576 1603 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.873e-40■□□□□ 8.9
DDX3XO00571 KMT5B-211ENST00000458496 556 ntTSL 427.06■■□□□ 1.922e-7■□□□□ 8.9
DDX3XO00571 KMT5B-210ENST00000453170 594 ntTSL 525.77■■□□□ 1.722e-7■□□□□ 8.9
DDX3XO00571 KMT5B-207ENST00000427752 2475 ntTSL 224.55■■□□□ 1.522e-7■□□□□ 8.9
DDX3XO00571 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.63■■□□□ 1.052e-7■□□□□ 8.9
DDX3XO00571 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.63■□□□□ 0.892e-7■□□□□ 8.9
DDX3XO00571 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.89■□□□□ 0.772e-7■□□□□ 8.9
DDX3XO00571 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.762e-7■□□□□ 8.9
DDX3XO00571 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.42■□□□□ 0.542e-7■□□□□ 8.9
DDX3XO00571 KMT5B-208ENST00000434573 585 ntTSL 416.9■□□□□ 0.32e-7■□□□□ 8.9
DDX3XO00571 KMT5B-212ENST00000466295 638 ntTSL 214.61□□□□□ -0.072e-7■□□□□ 8.9
DDX3XO00571 KMT5B-209ENST00000441488 2816 ntTSL 1 (best)9.68□□□□□ -0.862e-7■□□□□ 8.9
DDX3XO00571 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.462e-7■□□□□ 8.9
DDX3XO00571 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.92■□□□□ 0.942e-8■□□□□ 8.9
DDX3XO00571 HSD17B10-205ENST00000495986 666 ntTSL 520.39■□□□□ 0.852e-8■□□□□ 8.9
DDX3XO00571 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.542e-8■□□□□ 8.9
DDX3XO00571 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.43■□□□□ 0.222e-8■□□□□ 8.9
DDX3XO00571 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.3■□□□□ 0.25e-9■□□□□ 8.9
DDX3XO00571 PRPF38B-204ENST00000467302 2043 ntTSL 1 (best)16.02■□□□□ 0.165e-9■□□□□ 8.9
DDX3XO00571 PRPF38B-201ENST00000370021 3728 ntTSL 1 (best) BASIC11.19□□□□□ -0.625e-9■□□□□ 8.9
DDX3XO00571 PRPF38B-203ENST00000370025 3693 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.75e-9■□□□□ 8.9
DDX3XO00571 TBC1D8-204ENST00000463469 561 ntTSL 415.96■□□□□ 0.151e-17■□□□□ 8.9
DDX3XO00571 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.84■□□□□ 0.131e-17■□□□□ 8.9
DDX3XO00571 TBC1D8-201ENST00000376840 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.251e-17■□□□□ 8.9
DDX3XO00571 CFI-207ENST00000618244 1345 ntTSL 5 BASIC8.44□□□□□ -1.062e-12■□□□□ 8.9
DDX3XO00571 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.162e-12■□□□□ 8.9
DDX3XO00571 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.222e-12■□□□□ 8.9
DDX3XO00571 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.91□□□□□ -1.32e-12■□□□□ 8.9
DDX3XO00571 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.552e-12■□□□□ 8.9
DDX3XO00571 CYP4F12-205ENST00000518629 1915 ntTSL 217.27■□□□□ 0.353e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-217ENST00000551607 324 ntTSL 517.21■□□□□ 0.353e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-210ENST00000548237 630 ntTSL 414.35□□□□□ -0.113e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.173e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-214ENST00000550264 550 ntTSL 213.78□□□□□ -0.23e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.243e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-212ENST00000548501 598 ntTSL 312.76□□□□□ -0.373e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-202ENST00000430608 1303 ntTSL 212.44□□□□□ -0.423e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-207ENST00000546792 686 ntTSL 312.04□□□□□ -0.483e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-204ENST00000517734 2860 ntTSL 211.93□□□□□ -0.53e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-209ENST00000547471 573 ntTSL 411.7□□□□□ -0.543e-7■□□□□ 8.9
DDX3XO00571 DOK6-201ENST00000382713 8890 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.623e-12■□□□□ 8.9
DDX3XO00571 CYP4F12-213ENST00000549622 573 ntTSL 410.8□□□□□ -0.683e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-208ENST00000547332 593 ntTSL 49.7□□□□□ -0.863e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-203ENST00000451750 1011 ntTSL 28.94□□□□□ -0.983e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-211ENST00000548435 567 ntTSL 48.46□□□□□ -1.063e-7■□□□□ 8.9
DDX3XO00571 ACTB-211ENST00000480301 657 ntTSL 1 (best)21.65■■□□□ 1.061e-323■□□□□ 8.9
DDX3XO00571 ACTB-210ENST00000477812 820 ntTSL 221.02■□□□□ 0.961e-323■□□□□ 8.9
DDX3XO00571 ACTB-212ENST00000484841 1032 ntTSL 520.27■□□□□ 0.841e-323■□□□□ 8.9
DDX3XO00571 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.691e-323■□□□□ 8.9
DDX3XO00571 ACTB-207ENST00000462494 2245 ntTSL 518.47■□□□□ 0.551e-323■□□□□ 8.9
DDX3XO00571 ACTB-204ENST00000425660 1845 ntTSL 1 (best)16.4■□□□□ 0.221e-323■□□□□ 8.9
DDX3XO00571 ACTB-206ENST00000443528 569 ntTSL 416.29■□□□□ 0.21e-323■□□□□ 8.9
DDX3XO00571 ACTB-205ENST00000432588 568 ntTSL 416.22■□□□□ 0.191e-323■□□□□ 8.9
DDX3XO00571 ACTB-202ENST00000414620 561 ntTSL 415.71■□□□□ 0.111e-323■□□□□ 8.9
DDX3XO00571 ACTB-209ENST00000473257 556 ntTSL 311.17□□□□□ -0.621e-323■□□□□ 8.9
DDX3XO00571 EIF2A-214ENST00000487799 1913 ntTSL 2 BASIC12.86□□□□□ -0.353e-8■□□□□ 8.9
DDX3XO00571 EIF2A-209ENST00000473499 634 ntTSL 211.64□□□□□ -0.553e-8■□□□□ 8.9
DDX3XO00571 EIF2A-203ENST00000460851 2198 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.643e-8■□□□□ 8.9
DDX3XO00571 EIF2A-205ENST00000463863 565 ntTSL 210.87□□□□□ -0.673e-8■□□□□ 8.9
DDX3XO00571 EIF2A-204ENST00000462221 817 ntTSL 58.05□□□□□ -1.123e-8■□□□□ 8.9
DDX3XO00571 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.89□□□□□ -1.153e-8■□□□□ 8.9
DDX3XO00571 EIF2A-216ENST00000494558 710 ntTSL 57.7□□□□□ -1.183e-8■□□□□ 8.9
DDX3XO00571 EIF2A-212ENST00000482093 725 ntTSL 57.21□□□□□ -1.263e-8■□□□□ 8.9
DDX3XO00571 EIF2A-210ENST00000474505 1010 ntTSL 26.31□□□□□ -1.43e-8■□□□□ 8.9
DDX3XO00571 EIF2A-215ENST00000490505 568 ntTSL 54.66□□□□□ -1.663e-8■□□□□ 8.9
DDX3XO00571 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.683e-8■□□□□ 8.9
DDX3XO00571 EIF2A-207ENST00000469331 553 ntTSL 24.46□□□□□ -1.73e-8■□□□□ 8.9
DDX3XO00571 FASN-207ENST00000635197 627 ntTSL 316.01■□□□□ 0.153e-12■□□□□ 8.9
DDX3XO00571 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.223e-12■□□□□ 8.9
DDX3XO00571 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.243e-12■□□□□ 8.9
DDX3XO00571 FASN-213ENST00000637693 100 ntTSL 510.13□□□□□ -0.793e-12■□□□□ 8.9
DDX3XO00571 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC7.53□□□□□ -1.23e-12■□□□□ 8.9
DDX3XO00571 PRKCQ-AS1-212ENST00000613651 850 ntTSL 26.39□□□□□ -1.397e-10■□□□□ 8.9
DDX3XO00571 MCRIP2-210ENST00000620462 1594 ntTSL 520.26■□□□□ 0.831e-9■□□□□ 8.9
DDX3XO00571 MCRIP2-204ENST00000575894 1728 nt19.79■□□□□ 0.761e-9■□□□□ 8.9
DDX3XO00571 MCRIP2-206ENST00000615744 1379 ntTSL 319.44■□□□□ 0.71e-9■□□□□ 8.9
DDX3XO00571 MCRIP2-209ENST00000619674 2306 ntTSL 219.2■□□□□ 0.661e-9■□□□□ 8.9
DDX3XO00571 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.04■■□□□ 1.65e-8■□□□□ 8.8
DDX3XO00571 PPP4R4-204ENST00000555690 680 ntTSL 324.51■■□□□ 1.515e-8■□□□□ 8.8
DDX3XO00571 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.495e-8■□□□□ 8.8
DDX3XO00571 PEX10-203ENST00000502666 653 ntTSL 323.86■■□□□ 1.415e-8■□□□□ 8.8
DDX3XO00571 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.315e-8■□□□□ 8.8
DDX3XO00571 PEX10-206ENST00000510434 907 ntTSL 322.54■■□□□ 1.25e-8■□□□□ 8.8
DDX3XO00571 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.195e-8■□□□□ 8.8
DDX3XO00571 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.185e-8■□□□□ 8.8
DDX3XO00571 GYG2-208ENST00000520904 624 ntTSL 322.39■■□□□ 1.175e-8■□□□□ 8.8
DDX3XO00571 PEX10-207ENST00000514502 548 ntTSL 422.38■■□□□ 1.175e-8■□□□□ 8.8
DDX3XO00571 PEX10-208ENST00000515760 603 ntTSL 420.81■□□□□ 0.925e-8■□□□□ 8.8
DDX3XO00571 RSF1-202ENST00000440064 604 ntTSL 519.93■□□□□ 0.785e-8■□□□□ 8.8
DDX3XO00571 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.59■□□□□ 0.735e-8■□□□□ 8.8
DDX3XO00571 PCED1A-204ENST00000448755 1170 ntTSL 319.08■□□□□ 0.645e-8■□□□□ 8.8
DDX3XO00571 TTC7A-206ENST00000441914 2418 ntTSL 1 (best)18.82■□□□□ 0.65e-8■□□□□ 8.8
DDX3XO00571 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.5■□□□□ 0.555e-8■□□□□ 8.8
Retrieved 100 of 47,714 protein–RNA pairs in 3862.3 ms