Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PIK3CDP1-201ENST00000454229 922 ntBASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 AC119749.1-201ENST00000454884 691 ntBASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 VAMP7-203ENST00000460621 658 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 AC099542.2-201ENST00000474149 553 ntTSL 2 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 RN7SL782P-201ENST00000476421 294 ntBASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 MGC32805-201ENST00000503529 579 ntTSL 3 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 AC008514.1-203ENST00000518172 574 ntTSL 4 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 AC023043.1-201ENST00000568654 609 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 RPL36-204ENST00000579446 452 ntTSL 2 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 MIR3194-201ENST00000582236 73 ntBASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 SNHG15-208ENST00000584327 505 ntTSL 3 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 SNRPD2-204ENST00000587367 596 ntTSL 3 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 AC005580.1-201ENST00000592311 583 ntTSL 4 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 AC022031.2-201ENST00000592936 555 ntTSL 4 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 AC011491.3-201ENST00000595644 559 ntTSL 4 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 RN7SL803P-201ENST00000607433 307 ntBASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 NPIPB4-222ENST00000614197 1216 ntTSL 5 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 NPIPB12-209ENST00000617311 1216 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 NPIPB13-207ENST00000618637 1216 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 NPIPB5-227ENST00000621622 1216 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 AC061709.2-201ENST00000624053 898 ntBASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 SRP54-AS1-205ENST00000636540 565 ntBASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 CEPT1-201ENST00000357172 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 CHODL-207ENST00000543733 1637 ntTSL 2 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 TBC1D28-202ENST00000405044 1978 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 HAO2-201ENST00000325945 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 AL132996.1-201ENST00000569865 1431 ntTSL 5 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 MIR100HG-212ENST00000531381 3370 ntTSL 2 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 LINC01977-201ENST00000576963 1788 ntTSL 3 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 WDR6-220ENST00000608424 4070 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 SEZ6L2-203ENST00000350527 3173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 PRPH2-201ENST00000230381 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 KIR3DL1-202ENST00000358178 1564 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 LGALS9-203ENST00000395473 3114 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 SEC22B-201ENST00000578049 6922 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 SIRPB1-204ENST00000381603 1715 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 LINC02419-201ENST00000535487 1713 ntTSL 2 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 AKAP1-219ENST00000621116 4285 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 HNF4A-209ENST00000619550 4763 ntTSL 5 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 TOMM40L-202ENST00000367988 2708 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
NPIPA3F8WFD2 LINC01138-209ENST00000639181 1534 ntTSL 5 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 MRVI1-209ENST00000531107 2887 ntAPPRIS P3 TSL 2 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 OPRM1-208ENST00000434900 2033 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 IKZF4-203ENST00000547167 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 STAU2-202ENST00000517542 1695 ntTSL 2 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 EFCAB6-AS1-201ENST00000431327 2656 ntTSL 2 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 LAMB1-203ENST00000393560 2806 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 LINC01879-201ENST00000611889 2338 ntTSL 2 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 LINC02289-203ENST00000557526 1817 ntTSL 2 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 TUBBP1-201ENST00000248151 1335 ntBASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 POLB-201ENST00000265421 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 WDYHV1-201ENST00000287387 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 CDC42EP3-206ENST00000611976 5124 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 CNOT3-202ENST00000358389 4118 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 ZNF189-203ENST00000374861 3134 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 FOXN3P1-201ENST00000325117 1480 ntBASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 AP4B1-203ENST00000369567 2144 ntTSL 2 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 ACOT11-202ENST00000371316 6369 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 SLC27A6-203ENST00000506176 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 CTAGE16P-201ENST00000435601 2412 ntBASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 EAF1-201ENST00000396842 4690 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 CPA5-208ENST00000485477 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 GDF9-205ENST00000621295 1939 ntTSL 5 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 FPGT-TNNI3K-206ENST00000557284 2855 ntAPPRIS P2 TSL 2 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 PCDHGA1-202ENST00000517417 4604 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 OR10V1-201ENST00000307552 930 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 PPP1R32-202ENST00000366212 488 ntTSL 2 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 GYG2P1-203ENST00000382965 149 ntBASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 AC096582.1-201ENST00000413839 349 ntBASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 MOG-224ENST00000416766 630 ntTSL 5 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 HMGN2P11-201ENST00000446054 403 ntBASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 RPL37A-205ENST00000446558 495 ntTSL 5 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 LAMTOR5-AS1-202ENST00000457535 817 ntTSL 3 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 RN7SL806P-201ENST00000467399 282 ntBASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 TLE6-208ENST00000482627 456 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 AC091675.1-201ENST00000486251 351 ntBASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 RN7SL764P-201ENST00000487337 286 ntBASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 GAPDHP66-201ENST00000509132 967 ntBASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 AP002852.2-201ENST00000519630 740 ntTSL 5 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 AC026954.3-201ENST00000572417 421 ntTSL 2 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 ALOX12-AS1-209ENST00000575889 439 ntTSL 3 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 MBP-234ENST00000578193 578 ntTSL 5 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 MYL12A-206ENST00000578611 1004 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 AC097641.2-201ENST00000581517 325 ntBASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 AC007992.2-201ENST00000604771 835 ntBASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 AC020728.1-201ENST00000605749 1216 ntBASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 ZNF761-204ENST00000610928 938 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 FGFR2-223ENST00000611527 435 ntTSL 3 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 UBXN8-209ENST00000620074 1058 ntTSL 5 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 LINC01669-203ENST00000624105 505 ntTSL 5 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 AL160396.2-203ENST00000635901 877 ntAPPRIS P5 TSL 5 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 PSTPIP2-201ENST00000409746 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 NXF1-211ENST00000531709 4128 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 PTAR1-201ENST00000340434 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 MYO9A-201ENST00000356056 12411 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 SLC8A3-207ENST00000528359 2840 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 AL122008.3-201ENST00000412483 1723 ntTSL 2 BASIC10.12□□□□□ -0.79
NPIPA3F8WFD2 TOP3A-201ENST00000321105 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 1632.9 ms