Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TP53-203ENST00000413465 1018 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P04436 AL080273.1-201ENST00000414989 535 ntTSL 4 BASIC10.16□□□□□ -0.78
P04436 AL355574.1-201ENST00000423793 311 ntTSL 5 BASIC10.16□□□□□ -0.78
P04436 LINC01297-201ENST00000438574 519 ntTSL 3 BASIC10.16□□□□□ -0.78
P04436 ANO7L1-201ENST00000442385 328 ntTSL 3 BASIC10.16□□□□□ -0.78
P04436 RN7SL658P-201ENST00000463595 303 ntBASIC10.16□□□□□ -0.78
P04436 AC106806.1-201ENST00000466718 561 ntBASIC10.16□□□□□ -0.78
P04436 RPL23A-205ENST00000472628 639 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P04436 AC091675.1-201ENST00000486251 351 ntBASIC10.16□□□□□ -0.78
P04436 AC091849.2-201ENST00000503113 692 ntTSL 3 BASIC10.16□□□□□ -0.78
P04436 CYP4F44P-201ENST00000520423 412 ntBASIC10.16□□□□□ -0.78
P04436 ENY2-210ENST00000521662 562 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
P04436 AC017100.1-201ENST00000565978 1169 ntBASIC10.16□□□□□ -0.78
P04436 AC022748.2-201ENST00000569846 568 ntTSL 4 BASIC10.16□□□□□ -0.78
P04436 AC090282.1-202ENST00000575487 515 ntTSL 4 BASIC10.16□□□□□ -0.78
P04436 AC009088.4-201ENST00000575892 280 ntBASIC10.16□□□□□ -0.78
P04436 FAM222B-210ENST00000582059 561 ntTSL 4 BASIC10.16□□□□□ -0.78
P04436 AC005580.1-201ENST00000592311 583 ntTSL 4 BASIC10.16□□□□□ -0.78
P04436 AC068620.2-201ENST00000602927 529 ntBASIC10.16□□□□□ -0.78
P04436 SNORD3D-201ENST00000619178 218 ntBASIC10.16□□□□□ -0.78
P04436 AC020658.5-201ENST00000622487 442 ntBASIC10.16□□□□□ -0.78
P04436 AC024580.2-201ENST00000623363 231 ntBASIC10.16□□□□□ -0.78
P04436 DDX41-218ENST00000625286 150 ntTSL 5 BASIC10.16□□□□□ -0.78
P04436 DDX41-219ENST00000629036 606 ntTSL 4 BASIC10.16□□□□□ -0.78
P04436 OR6B3-202ENST00000641019 1097 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
P04436 SERPINA3-202ENST00000393080 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04436 NEFM-203ENST00000437366 3148 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
P04436 ELP2-201ENST00000350494 2487 ntTSL 2 BASIC10.16□□□□□ -0.78
P04436 RC3H2-202ENST00000357244 3991 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
P04436 PFKFB3-205ENST00000379789 4157 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P04436 LOXHD1-207ENST00000441551 6226 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
P04436 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC10.16□□□□□ -0.78
P04436 PALLD-201ENST00000261509 5809 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04436 CDH5-208ENST00000614547 3779 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P04436 ATP6V1G2-DDX39B-201ENST00000376185 2039 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
P04436 ITSN1-211ENST00000399355 4003 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P04436 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04436 TSPYL6-201ENST00000317802 3089 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
P04436 EPHA5-205ENST00000613740 8355 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
P04436 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
P04436 DMRT1-203ENST00000569227 1385 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
P04436 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC10.15□□□□□ -0.78
P04436 SEC24A-201ENST00000322887 2700 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
P04436 FAM47E-203ENST00000510197 1624 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
P04436 UGT1A8-201ENST00000373450 2407 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
P04436 GOLGA2-201ENST00000421699 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
P04436 RIC3-203ENST00000343202 2929 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
P04436 SLC7A5-203ENST00000565644 3983 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
P04436 MAPK8-207ENST00000395611 5844 ntAPPRIS ALT1 TSL 2 BASIC10.15□□□□□ -0.78
P04436 PARG-207ENST00000616448 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
P04436 HHAT-206ENST00000537898 3446 ntTSL 2 BASIC10.15□□□□□ -0.78
P04436 AL390205.1-201ENST00000381279 1586 ntBASIC10.15□□□□□ -0.78
P04436 CCDC112-202ENST00000395557 2069 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
P04436 KLHL1-201ENST00000377844 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
P04436 ATP6V0A4-203ENST00000393054 3090 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
P04436 PRSS1-201ENST00000311737 800 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
P04436 NCR3-203ENST00000376072 875 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
P04436 TRBV5-5-201ENST00000390372 350 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
P04436 CELP-202ENST00000421286 1125 ntBASIC10.15□□□□□ -0.78
P04436 AC013448.1-201ENST00000422118 808 ntTSL 3 BASIC10.15□□□□□ -0.78
P04436 AL049542.1-201ENST00000430231 278 ntBASIC10.15□□□□□ -0.78
P04436 PATE2-202ENST00000436890 738 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
P04436 ATF4P4-202ENST00000438498 1049 ntBASIC10.15□□□□□ -0.78
P04436 AF274858.2-201ENST00000446370 617 ntTSL 2 BASIC10.15□□□□□ -0.78
P04436 C11orf94-201ENST00000449465 369 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
P04436 CLCP1-201ENST00000455251 388 ntBASIC10.15□□□□□ -0.78
P04436 WASH6P-207ENST00000476066 720 ntTSL 5 BASIC10.15□□□□□ -0.78
P04436 RN7SL191P-201ENST00000484366 305 ntBASIC10.15□□□□□ -0.78
P04436 AC092611.2-201ENST00000508664 304 ntTSL 3 BASIC10.15□□□□□ -0.78
P04436 SNORA73.4-201ENST00000517281 115 ntBASIC10.15□□□□□ -0.78
P04436 AP003063.1-203ENST00000529827 461 ntTSL 2 BASIC10.15□□□□□ -0.78
P04436 AC007637.1-201ENST00000541704 910 ntTSL 5 BASIC10.15□□□□□ -0.78
P04436 RBM17P4-201ENST00000558517 1192 ntBASIC10.15□□□□□ -0.78
P04436 AC092338.1-201ENST00000566764 423 ntTSL 5 BASIC10.15□□□□□ -0.78
P04436 TMPOP2-201ENST00000575258 1201 ntBASIC10.15□□□□□ -0.78
P04436 AP005208.1-201ENST00000582863 208 ntBASIC10.15□□□□□ -0.78
P04436 AP001180.4-201ENST00000584167 823 ntTSL 3 BASIC10.15□□□□□ -0.78
P04436 CNFN-202ENST00000597255 502 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
P04436 AC008750.4-201ENST00000600974 219 ntTSL 3 BASIC10.15□□□□□ -0.78
P04436 AP001993.2-201ENST00000609688 561 ntTSL 3 BASIC10.15□□□□□ -0.78
P04436 AL136439.1-201ENST00000611364 862 ntTSL 3 BASIC10.15□□□□□ -0.78
P04436 ORAI1-201ENST00000611718 852 ntTSL 5 BASIC10.15□□□□□ -0.78
P04436 Metazoa_SRP.135-201ENST00000616324 269 ntBASIC10.15□□□□□ -0.78
P04436 GAPDH-211ENST00000619601 1086 ntTSL 5 BASIC10.15□□□□□ -0.78
P04436 TEAD1-207ENST00000638666 1281 ntAPPRIS P2 TSL 2 BASIC10.15□□□□□ -0.78
P04436 TMPRSS4-218ENST00000534111 5550 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
P04436 PRRX1-207ENST00000497230 3501 ntTSL 2 BASIC10.15□□□□□ -0.78
P04436 HNF4A-209ENST00000619550 4763 ntTSL 5 BASIC10.15□□□□□ -0.78
P04436 EMC1-207ENST00000477853 6664 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
P04436 WDR59-223ENST00000616369 1953 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
P04436 TM2D3-215ENST00000561373 1734 ntTSL 2 BASIC10.15□□□□□ -0.78
P04436 DLEU1-231ENST00000490577 2440 ntTSL 5 BASIC10.15□□□□□ -0.79
P04436 FAM69A-205ENST00000616709 2426 ntTSL 3 BASIC10.15□□□□□ -0.79
P04436 REN-201ENST00000272190 1447 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
P04436 MOCS1-203ENST00000373186 4256 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
P04436 AL445675.1-201ENST00000603868 1410 ntBASIC10.15□□□□□ -0.79
P04436 DCLRE1C-210ENST00000378289 3532 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
P04436 AL136115.3-201ENST00000641788 1873 ntBASIC10.15□□□□□ -0.79
P04436 SLC4A9-204ENST00000506757 3277 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
P04436 LILRB1-201ENST00000324602 2774 ntAPPRIS P4 TSL 5 BASIC10.14□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 244.3 ms