Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 LINC00539-203ENST00000434601 960 ntTSL 5 BASIC10.22□□□□□ -0.77
P04436 USF1P1-201ENST00000451645 526 ntBASIC10.22□□□□□ -0.77
P04436 LAMTOR4-207ENST00000474141 519 ntTSL 2 BASIC10.22□□□□□ -0.77
P04436 MT1DP-202ENST00000486551 150 ntBASIC10.22□□□□□ -0.77
P04436 AP000640.2-202ENST00000531276 683 ntTSL 3 BASIC10.22□□□□□ -0.77
P04436 CACNA1C-AS1-203ENST00000544517 742 ntTSL 4 BASIC10.22□□□□□ -0.77
P04436 MEOX1-204ENST00000549132 1152 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P04436 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC10.22□□□□□ -0.77
P04436 AC103996.2-201ENST00000556763 915 ntTSL 3 BASIC10.22□□□□□ -0.77
P04436 AC134312.4-201ENST00000568267 559 ntTSL 4 BASIC10.22□□□□□ -0.77
P04436 AC009107.2-201ENST00000569580 577 ntTSL 4 BASIC10.22□□□□□ -0.77
P04436 AC133065.4-201ENST00000570440 1159 ntBASIC10.22□□□□□ -0.77
P04436 RMRP-201ENST00000602361 268 ntBASIC10.22□□□□□ -0.77
P04436 FP236240.2-201ENST00000623896 1052 ntTSL 2 BASIC10.22□□□□□ -0.77
P04436 RUVBL2-212ENST00000627972 1065 ntTSL 5 BASIC10.22□□□□□ -0.77
P04436 SRP54-AS1-205ENST00000636540 565 ntBASIC10.22□□□□□ -0.77
P04436 RIN2-201ENST00000255006 4505 ntAPPRIS P2 TSL 2 BASIC10.22□□□□□ -0.77
P04436 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC10.22□□□□□ -0.77
P04436 EXD2-206ENST00000409949 2688 ntTSL 2 BASIC10.22□□□□□ -0.77
P04436 PCNP-204ENST00000469941 2028 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P04436 TP53TG3E-202ENST00000623491 2026 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
P04436 AC009078.3-201ENST00000624205 4084 ntBASIC10.22□□□□□ -0.77
P04436 TOMM40L-202ENST00000367988 2708 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
P04436 DAZAP2-205ENST00000449723 2098 ntTSL 5 BASIC10.22□□□□□ -0.77
P04436 KLK2-202ENST00000358049 2847 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P04436 IQCJ-204ENST00000482126 1408 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
P04436 CASC15-202ENST00000561912 1449 ntTSL 5 BASIC10.22□□□□□ -0.77
P04436 APBA2-204ENST00000558259 3635 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P04436 LYAR-202ENST00000452476 1468 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
P04436 ATP9B-203ENST00000458297 1507 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P04436 KC6-207ENST00000600644 2311 ntTSL 3 BASIC10.22□□□□□ -0.77
P04436 PATJ-201ENST00000307297 1585 ntTSL 2 BASIC10.22□□□□□ -0.77
P04436 SPATA3-206ENST00000452881 1618 ntAPPRIS P2 TSL 2 BASIC10.22□□□□□ -0.77
P04436 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P04436 WDR78-202ENST00000371023 1697 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P04436 ANKS1B-210ENST00000547446 1690 ntTSL 2 BASIC10.22□□□□□ -0.77
P04436 DNMT3B-201ENST00000201963 4255 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P04436 WDR36-203ENST00000506538 7048 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P04436 MMAA-201ENST00000281317 7068 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
P04436 LINC00114-201ENST00000411989 1790 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P04436 AC131254.1-201ENST00000507496 1867 ntTSL 2 BASIC10.21□□□□□ -0.77
P04436 TNFRSF9-201ENST00000377507 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P04436 HOXA-AS2-201ENST00000517550 2022 ntTSL 2 BASIC10.21□□□□□ -0.77
P04436 PBRM1-201ENST00000296302 5145 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P04436 AFF2-205ENST00000370460 13746 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
P04436 RIMS2-207ENST00000504942 4228 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
P04436 PNMA6F-201ENST00000436629 3348 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
P04436 CEACAM19-201ENST00000358777 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
P04436 APP-201ENST00000346798 3467 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
P04436 MPP2-203ENST00000461854 3462 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P04436 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
P04436 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
P04436 ARMT1-204ENST00000545879 2495 ntTSL 2 BASIC10.21□□□□□ -0.77
P04436 LINC00485-201ENST00000547179 3722 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P04436 PLUT-201ENST00000499662 2518 ntTSL 3 BASIC10.21□□□□□ -0.77
P04436 IKZF4-203ENST00000547167 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P04436 ERCC1-202ENST00000300853 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P04436 CNIH1-202ENST00000395573 1233 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P04436 C22orf23-202ENST00000403026 765 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
P04436 MOG-224ENST00000416766 630 ntTSL 5 BASIC10.21□□□□□ -0.77
P04436 AL590408.1-201ENST00000430905 453 ntTSL 3 BASIC10.21□□□□□ -0.77
P04436 OR7E38P-201ENST00000442908 985 ntBASIC10.21□□□□□ -0.77
P04436 COMMD9-203ENST00000452374 917 ntTSL 2 BASIC10.21□□□□□ -0.77
P04436 AL133163.1-201ENST00000459899 949 ntBASIC10.21□□□□□ -0.77
P04436 AC138781.1-201ENST00000501322 505 ntTSL 3 BASIC10.21□□□□□ -0.77
P04436 AP002852.2-201ENST00000519630 740 ntTSL 5 BASIC10.21□□□□□ -0.77
P04436 AP003390.2-201ENST00000529229 559 ntTSL 4 BASIC10.21□□□□□ -0.77
P04436 AC012555.1-201ENST00000551650 674 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P04436 AL391152.1-201ENST00000554160 1111 ntTSL 2 BASIC10.21□□□□□ -0.77
P04436 CNIH1-207ENST00000557690 838 ntTSL 3 BASIC10.21□□□□□ -0.77
P04436 AC097641.2-201ENST00000581517 325 ntBASIC10.21□□□□□ -0.77
P04436 ZNF506-206ENST00000587452 575 ntTSL 4 BASIC10.21□□□□□ -0.77
P04436 AC005702.1-201ENST00000593015 692 ntTSL 2 BASIC10.21□□□□□ -0.77
P04436 AL359643.3-201ENST00000606761 1086 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P04436 AC026355.3-201ENST00000611065 727 ntBASIC10.21□□□□□ -0.77
P04436 UBXN8-209ENST00000620074 1058 ntTSL 5 BASIC10.21□□□□□ -0.77
P04436 AL021920.1-201ENST00000624517 406 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P04436 OR7E22P-202ENST00000641331 1154 ntBASIC10.21□□□□□ -0.77
P04436 OR7E22P-203ENST00000641370 1242 ntBASIC10.21□□□□□ -0.77
P04436 TUBBP1-201ENST00000248151 1335 ntBASIC10.21□□□□□ -0.78
P04436 LINC00570-201ENST00000417473 1330 ntTSL 2 BASIC10.21□□□□□ -0.78
P04436 PLEC-205ENST00000356346 14683 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
P04436 PLEC-206ENST00000357649 14689 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
P04436 ZNF200-209ENST00000575948 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
P04436 RFESD-203ENST00000458310 2788 ntTSL 5 BASIC10.21□□□□□ -0.78
P04436 AL353611.2-201ENST00000625008 2897 ntBASIC10.21□□□□□ -0.78
P04436 ACACB-202ENST00000377848 9247 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P04436 ERCC1-204ENST00000423698 3119 ntTSL 2 BASIC10.21□□□□□ -0.78
P04436 PXYLP1-202ENST00000393010 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P04436 AC008575.2-202ENST00000506997 1643 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.78
P04436 GABRA5-201ENST00000335625 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P04436 AC090124.3-201ENST00000265458 1673 ntBASIC10.21□□□□□ -0.78
P04436 MRO-204ENST00000431965 1657 ntTSL 2 BASIC10.21□□□□□ -0.78
P04436 IL17REL-201ENST00000341280 3500 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
P04436 UVRAG-209ENST00000533454 1823 ntTSL 5 BASIC10.21□□□□□ -0.78
P04436 ATP6V1H-203ENST00000396774 1892 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
P04436 AC002101.1-201ENST00000564021 1990 ntTSL 3 BASIC10.21□□□□□ -0.78
P04436 CHRM2-204ENST00000453373 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P04436 SERPINA5-203ENST00000553780 2071 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
P04436 AL359736.1-201ENST00000382141 4157 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms