Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD3-BMI1R4GMX3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
COMMD3-BMI1R4GMX3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
COMMD3-BMI1R4GMX3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.84■□□□□ 0.77
COMMD3-BMI1R4GMX3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
COMMD3-BMI1R4GMX3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD3-BMI1R4GMX3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COMMD3-BMI1R4GMX3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COMMD3-BMI1R4GMX3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COMMD3-BMI1R4GMX3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
COMMD3-BMI1R4GMX3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COMMD3-BMI1R4GMX3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.83■□□□□ 0.77
COMMD3-BMI1R4GMX3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.83■□□□□ 0.77
COMMD3-BMI1R4GMX3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COMMD3-BMI1R4GMX3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COMMD3-BMI1R4GMX3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COMMD3-BMI1R4GMX3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.76
COMMD3-BMI1R4GMX3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
COMMD3-BMI1R4GMX3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COMMD3-BMI1R4GMX3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
COMMD3-BMI1R4GMX3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.83■□□□□ 0.76
COMMD3-BMI1R4GMX3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COMMD3-BMI1R4GMX3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.83■□□□□ 0.76
COMMD3-BMI1R4GMX3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COMMD3-BMI1R4GMX3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COMMD3-BMI1R4GMX3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
COMMD3-BMI1R4GMX3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COMMD3-BMI1R4GMX3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.82■□□□□ 0.76
COMMD3-BMI1R4GMX3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
COMMD3-BMI1R4GMX3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
COMMD3-BMI1R4GMX3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COMMD3-BMI1R4GMX3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COMMD3-BMI1R4GMX3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.82■□□□□ 0.76
COMMD3-BMI1R4GMX3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
COMMD3-BMI1R4GMX3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD3-BMI1R4GMX3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.81■□□□□ 0.76
COMMD3-BMI1R4GMX3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD3-BMI1R4GMX3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD3-BMI1R4GMX3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD3-BMI1R4GMX3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
COMMD3-BMI1R4GMX3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
COMMD3-BMI1R4GMX3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.81■□□□□ 0.76
COMMD3-BMI1R4GMX3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.81■□□□□ 0.76
COMMD3-BMI1R4GMX3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.81■□□□□ 0.76
COMMD3-BMI1R4GMX3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD3-BMI1R4GMX3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD3-BMI1R4GMX3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD3-BMI1R4GMX3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.81■□□□□ 0.76
COMMD3-BMI1R4GMX3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
COMMD3-BMI1R4GMX3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD3-BMI1R4GMX3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD3-BMI1R4GMX3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD3-BMI1R4GMX3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COMMD3-BMI1R4GMX3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COMMD3-BMI1R4GMX3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
COMMD3-BMI1R4GMX3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
COMMD3-BMI1R4GMX3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COMMD3-BMI1R4GMX3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COMMD3-BMI1R4GMX3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
COMMD3-BMI1R4GMX3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.8■□□□□ 0.76
COMMD3-BMI1R4GMX3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.8■□□□□ 0.76
COMMD3-BMI1R4GMX3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COMMD3-BMI1R4GMX3 SMG8-203ENST00000578922 2178 ntBASIC19.8■□□□□ 0.76
COMMD3-BMI1R4GMX3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
COMMD3-BMI1R4GMX3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.8■□□□□ 0.76
COMMD3-BMI1R4GMX3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COMMD3-BMI1R4GMX3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.79■□□□□ 0.76
COMMD3-BMI1R4GMX3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
COMMD3-BMI1R4GMX3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.79■□□□□ 0.76
COMMD3-BMI1R4GMX3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
COMMD3-BMI1R4GMX3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
COMMD3-BMI1R4GMX3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COMMD3-BMI1R4GMX3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COMMD3-BMI1R4GMX3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
COMMD3-BMI1R4GMX3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COMMD3-BMI1R4GMX3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.79■□□□□ 0.76
COMMD3-BMI1R4GMX3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COMMD3-BMI1R4GMX3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COMMD3-BMI1R4GMX3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
COMMD3-BMI1R4GMX3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
COMMD3-BMI1R4GMX3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COMMD3-BMI1R4GMX3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COMMD3-BMI1R4GMX3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.79■□□□□ 0.76
COMMD3-BMI1R4GMX3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.79■□□□□ 0.76
COMMD3-BMI1R4GMX3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.79■□□□□ 0.76
COMMD3-BMI1R4GMX3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COMMD3-BMI1R4GMX3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.78■□□□□ 0.76
COMMD3-BMI1R4GMX3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COMMD3-BMI1R4GMX3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.78■□□□□ 0.76
COMMD3-BMI1R4GMX3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
COMMD3-BMI1R4GMX3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.78■□□□□ 0.76
COMMD3-BMI1R4GMX3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
COMMD3-BMI1R4GMX3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COMMD3-BMI1R4GMX3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COMMD3-BMI1R4GMX3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.78■□□□□ 0.76
COMMD3-BMI1R4GMX3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COMMD3-BMI1R4GMX3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COMMD3-BMI1R4GMX3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
COMMD3-BMI1R4GMX3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COMMD3-BMI1R4GMX3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms