Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
HCFC2Q9Y5Z7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
HCFC2Q9Y5Z7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.35■■□□□ 1.17
HCFC2Q9Y5Z7 RBM17P2-201ENST00000616397 1405 ntBASIC22.35■■□□□ 1.17
HCFC2Q9Y5Z7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
HCFC2Q9Y5Z7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC22.35■■□□□ 1.17
HCFC2Q9Y5Z7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HCFC2Q9Y5Z7 AL591742.1-201ENST00000604433 565 ntBASIC22.35■■□□□ 1.17
HCFC2Q9Y5Z7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.35■■□□□ 1.17
HCFC2Q9Y5Z7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.35■■□□□ 1.17
HCFC2Q9Y5Z7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
HCFC2Q9Y5Z7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HCFC2Q9Y5Z7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
HCFC2Q9Y5Z7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
HCFC2Q9Y5Z7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
HCFC2Q9Y5Z7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HCFC2Q9Y5Z7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HCFC2Q9Y5Z7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
HCFC2Q9Y5Z7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
HCFC2Q9Y5Z7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HCFC2Q9Y5Z7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC22.34■■□□□ 1.17
HCFC2Q9Y5Z7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.34■■□□□ 1.17
HCFC2Q9Y5Z7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
HCFC2Q9Y5Z7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HCFC2Q9Y5Z7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.34■■□□□ 1.17
HCFC2Q9Y5Z7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.33■■□□□ 1.17
HCFC2Q9Y5Z7 KRT16P2-201ENST00000414673 1423 ntBASIC22.33■■□□□ 1.17
HCFC2Q9Y5Z7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HCFC2Q9Y5Z7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
HCFC2Q9Y5Z7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
HCFC2Q9Y5Z7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HCFC2Q9Y5Z7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC22.33■■□□□ 1.17
HCFC2Q9Y5Z7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.33■■□□□ 1.17
HCFC2Q9Y5Z7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.33■■□□□ 1.17
HCFC2Q9Y5Z7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HCFC2Q9Y5Z7 AC006058.3-201ENST00000606217 1069 ntBASIC22.33■■□□□ 1.17
HCFC2Q9Y5Z7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.33■■□□□ 1.17
HCFC2Q9Y5Z7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.33■■□□□ 1.16
HCFC2Q9Y5Z7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.32■■□□□ 1.16
HCFC2Q9Y5Z7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HCFC2Q9Y5Z7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HCFC2Q9Y5Z7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HCFC2Q9Y5Z7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
HCFC2Q9Y5Z7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.32■■□□□ 1.16
HCFC2Q9Y5Z7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.32■■□□□ 1.16
HCFC2Q9Y5Z7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HCFC2Q9Y5Z7 AC137767.1-201ENST00000602918 1920 ntBASIC22.31■■□□□ 1.16
HCFC2Q9Y5Z7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HCFC2Q9Y5Z7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HCFC2Q9Y5Z7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.31■■□□□ 1.16
HCFC2Q9Y5Z7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
HCFC2Q9Y5Z7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
HCFC2Q9Y5Z7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC22.31■■□□□ 1.16
HCFC2Q9Y5Z7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HCFC2Q9Y5Z7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
HCFC2Q9Y5Z7 AC128676.1-201ENST00000454392 318 ntBASIC22.31■■□□□ 1.16
HCFC2Q9Y5Z7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.31■■□□□ 1.16
HCFC2Q9Y5Z7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.31■■□□□ 1.16
HCFC2Q9Y5Z7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22.31■■□□□ 1.16
HCFC2Q9Y5Z7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.31■■□□□ 1.16
HCFC2Q9Y5Z7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HCFC2Q9Y5Z7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.3■■□□□ 1.16
HCFC2Q9Y5Z7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HCFC2Q9Y5Z7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HCFC2Q9Y5Z7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.3■■□□□ 1.16
HCFC2Q9Y5Z7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.3■■□□□ 1.16
HCFC2Q9Y5Z7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.3■■□□□ 1.16
HCFC2Q9Y5Z7 AL158047.1-201ENST00000445918 881 ntBASIC22.3■■□□□ 1.16
HCFC2Q9Y5Z7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.3■■□□□ 1.16
HCFC2Q9Y5Z7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.3■■□□□ 1.16
HCFC2Q9Y5Z7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
HCFC2Q9Y5Z7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.3■■□□□ 1.16
HCFC2Q9Y5Z7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.29■■□□□ 1.16
HCFC2Q9Y5Z7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HCFC2Q9Y5Z7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.29■■□□□ 1.16
HCFC2Q9Y5Z7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
HCFC2Q9Y5Z7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
HCFC2Q9Y5Z7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.29■■□□□ 1.16
HCFC2Q9Y5Z7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.29■■□□□ 1.16
HCFC2Q9Y5Z7 AC243732.1-201ENST00000612648 864 ntBASIC22.29■■□□□ 1.16
HCFC2Q9Y5Z7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.29■■□□□ 1.16
HCFC2Q9Y5Z7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
HCFC2Q9Y5Z7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.29■■□□□ 1.16
HCFC2Q9Y5Z7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HCFC2Q9Y5Z7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
HCFC2Q9Y5Z7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.28■■□□□ 1.16
HCFC2Q9Y5Z7 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.28■■□□□ 1.16
HCFC2Q9Y5Z7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.28■■□□□ 1.16
HCFC2Q9Y5Z7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.28■■□□□ 1.16
HCFC2Q9Y5Z7 AC142381.4-202ENST00000563973 229 ntBASIC22.28■■□□□ 1.16
HCFC2Q9Y5Z7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HCFC2Q9Y5Z7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HCFC2Q9Y5Z7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HCFC2Q9Y5Z7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HCFC2Q9Y5Z7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HCFC2Q9Y5Z7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.27■■□□□ 1.16
HCFC2Q9Y5Z7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.27■■□□□ 1.16
HCFC2Q9Y5Z7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HCFC2Q9Y5Z7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
HCFC2Q9Y5Z7 SERPINH1P1-201ENST00000419794 1249 ntBASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms