Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA9Q9Y5G4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
PCDHGA9Q9Y5G4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA9Q9Y5G4 AF201337.1-201ENST00000520239 748 ntBASIC19.82■□□□□ 0.76
PCDHGA9Q9Y5G4 AC133041.1-202ENST00000642053 222 ntBASIC19.82■□□□□ 0.76
PCDHGA9Q9Y5G4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PCDHGA9Q9Y5G4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA9Q9Y5G4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHGA9Q9Y5G4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA9Q9Y5G4 AC137767.1-201ENST00000602918 1920 ntBASIC19.82■□□□□ 0.76
PCDHGA9Q9Y5G4 ECEL1P1-201ENST00000373592 1742 ntBASIC19.82■□□□□ 0.76
PCDHGA9Q9Y5G4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA9Q9Y5G4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA9Q9Y5G4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDHGA9Q9Y5G4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA9Q9Y5G4 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDHGA9Q9Y5G4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA9Q9Y5G4 AC069152.1-201ENST00000438030 544 ntBASIC19.81■□□□□ 0.76
PCDHGA9Q9Y5G4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA9Q9Y5G4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PCDHGA9Q9Y5G4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.81■□□□□ 0.76
PCDHGA9Q9Y5G4 AL138781.1-201ENST00000566567 1274 ntBASIC19.81■□□□□ 0.76
PCDHGA9Q9Y5G4 AC138907.5-202ENST00000569484 235 ntBASIC19.81■□□□□ 0.76
PCDHGA9Q9Y5G4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA9Q9Y5G4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA9Q9Y5G4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PCDHGA9Q9Y5G4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDHGA9Q9Y5G4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA9Q9Y5G4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA9Q9Y5G4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDHGA9Q9Y5G4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
PCDHGA9Q9Y5G4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA9Q9Y5G4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PCDHGA9Q9Y5G4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA9Q9Y5G4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA9Q9Y5G4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
PCDHGA9Q9Y5G4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PCDHGA9Q9Y5G4 CNN2P6-201ENST00000439038 900 ntBASIC19.8■□□□□ 0.76
PCDHGA9Q9Y5G4 AC010141.2-201ENST00000452426 721 ntBASIC19.8■□□□□ 0.76
PCDHGA9Q9Y5G4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.8■□□□□ 0.76
PCDHGA9Q9Y5G4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHGA9Q9Y5G4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PCDHGA9Q9Y5G4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDHGA9Q9Y5G4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA9Q9Y5G4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
PCDHGA9Q9Y5G4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA9Q9Y5G4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHGA9Q9Y5G4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA9Q9Y5G4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA9Q9Y5G4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA9Q9Y5G4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA9Q9Y5G4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA9Q9Y5G4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHGA9Q9Y5G4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA9Q9Y5G4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA9Q9Y5G4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
PCDHGA9Q9Y5G4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA9Q9Y5G4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA9Q9Y5G4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA9Q9Y5G4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA9Q9Y5G4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA9Q9Y5G4 AC010536.3-201ENST00000620306 533 ntBASIC19.79■□□□□ 0.76
PCDHGA9Q9Y5G4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA9Q9Y5G4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA9Q9Y5G4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDHGA9Q9Y5G4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.79■□□□□ 0.76
PCDHGA9Q9Y5G4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA9Q9Y5G4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDHGA9Q9Y5G4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA9Q9Y5G4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA9Q9Y5G4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA9Q9Y5G4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA9Q9Y5G4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA9Q9Y5G4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDHGA9Q9Y5G4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA9Q9Y5G4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDHGA9Q9Y5G4 AC079089.2-201ENST00000531211 1277 ntBASIC19.78■□□□□ 0.76
PCDHGA9Q9Y5G4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.78■□□□□ 0.76
PCDHGA9Q9Y5G4 AC066615.1-201ENST00000640911 628 ntBASIC19.78■□□□□ 0.76
PCDHGA9Q9Y5G4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA9Q9Y5G4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA9Q9Y5G4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA9Q9Y5G4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA9Q9Y5G4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA9Q9Y5G4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
PCDHGA9Q9Y5G4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA9Q9Y5G4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA9Q9Y5G4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PCDHGA9Q9Y5G4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PCDHGA9Q9Y5G4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA9Q9Y5G4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA9Q9Y5G4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA9Q9Y5G4 SLC7A5P1-201ENST00000568957 537 ntBASIC19.77■□□□□ 0.76
PCDHGA9Q9Y5G4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
PCDHGA9Q9Y5G4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
PCDHGA9Q9Y5G4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA9Q9Y5G4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA9Q9Y5G4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA9Q9Y5G4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDHGA9Q9Y5G4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms