Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.86■□□□□ 0.61
LSM2Q9Y333 PLK5-205ENST00000642079 1969 ntBASIC18.86■□□□□ 0.61
LSM2Q9Y333 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LSM2Q9Y333 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM2Q9Y333 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM2Q9Y333 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.85■□□□□ 0.61
LSM2Q9Y333 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM2Q9Y333 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM2Q9Y333 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM2Q9Y333 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LSM2Q9Y333 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.85■□□□□ 0.61
LSM2Q9Y333 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
LSM2Q9Y333 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.85■□□□□ 0.61
LSM2Q9Y333 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM2Q9Y333 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.85■□□□□ 0.61
LSM2Q9Y333 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.85■□□□□ 0.61
LSM2Q9Y333 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LSM2Q9Y333 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM2Q9Y333 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LSM2Q9Y333 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM2Q9Y333 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM2Q9Y333 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LSM2Q9Y333 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM2Q9Y333 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM2Q9Y333 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LSM2Q9Y333 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM2Q9Y333 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM2Q9Y333 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM2Q9Y333 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.84■□□□□ 0.61
LSM2Q9Y333 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.84■□□□□ 0.61
LSM2Q9Y333 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.84■□□□□ 0.61
LSM2Q9Y333 AC003102.1-202ENST00000563394 1796 ntBASIC18.84■□□□□ 0.61
LSM2Q9Y333 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
LSM2Q9Y333 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LSM2Q9Y333 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM2Q9Y333 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM2Q9Y333 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LSM2Q9Y333 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.84■□□□□ 0.61
LSM2Q9Y333 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.84■□□□□ 0.61
LSM2Q9Y333 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.84■□□□□ 0.61
LSM2Q9Y333 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.84■□□□□ 0.61
LSM2Q9Y333 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM2Q9Y333 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LSM2Q9Y333 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.84■□□□□ 0.61
LSM2Q9Y333 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM2Q9Y333 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.84■□□□□ 0.61
LSM2Q9Y333 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM2Q9Y333 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM2Q9Y333 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM2Q9Y333 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.84■□□□□ 0.61
LSM2Q9Y333 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LSM2Q9Y333 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.84■□□□□ 0.61
LSM2Q9Y333 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM2Q9Y333 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM2Q9Y333 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSM2Q9Y333 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSM2Q9Y333 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSM2Q9Y333 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSM2Q9Y333 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSM2Q9Y333 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LSM2Q9Y333 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
LSM2Q9Y333 ABHD17AP5-201ENST00000580133 923 ntBASIC18.83■□□□□ 0.6
LSM2Q9Y333 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSM2Q9Y333 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSM2Q9Y333 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSM2Q9Y333 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LSM2Q9Y333 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSM2Q9Y333 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LSM2Q9Y333 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LSM2Q9Y333 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.83■□□□□ 0.6
LSM2Q9Y333 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSM2Q9Y333 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSM2Q9Y333 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LSM2Q9Y333 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.82■□□□□ 0.6
LSM2Q9Y333 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
LSM2Q9Y333 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.82■□□□□ 0.6
LSM2Q9Y333 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.82■□□□□ 0.6
LSM2Q9Y333 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.82■□□□□ 0.6
LSM2Q9Y333 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSM2Q9Y333 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSM2Q9Y333 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LSM2Q9Y333 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSM2Q9Y333 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LSM2Q9Y333 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.81■□□□□ 0.6
LSM2Q9Y333 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.81■□□□□ 0.6
LSM2Q9Y333 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSM2Q9Y333 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.81■□□□□ 0.6
LSM2Q9Y333 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSM2Q9Y333 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSM2Q9Y333 AC027702.1-201ENST00000563810 1770 ntBASIC18.81■□□□□ 0.6
LSM2Q9Y333 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
LSM2Q9Y333 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSM2Q9Y333 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSM2Q9Y333 TSPY13P-201ENST00000338964 914 ntBASIC18.81■□□□□ 0.6
LSM2Q9Y333 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSM2Q9Y333 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.81■□□□□ 0.6
LSM2Q9Y333 AL451085.2-201ENST00000605085 799 ntBASIC18.81■□□□□ 0.6
LSM2Q9Y333 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.81■□□□□ 0.6
LSM2Q9Y333 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.81■□□□□ 0.6
LSM2Q9Y333 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms