Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
CDK11AQ9UQ88 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
CDK11AQ9UQ88 AC010980.2-201ENST00000587099 1412 ntBASIC33.01■■■□□ 2.87
CDK11AQ9UQ88 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
CDK11AQ9UQ88 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
CDK11AQ9UQ88 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CDK11AQ9UQ88 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CDK11AQ9UQ88 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC33■■■□□ 2.87
CDK11AQ9UQ88 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC33■■■□□ 2.87
CDK11AQ9UQ88 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC33■■■□□ 2.87
CDK11AQ9UQ88 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CDK11AQ9UQ88 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC33■■■□□ 2.87
CDK11AQ9UQ88 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC32.99■■■□□ 2.87
CDK11AQ9UQ88 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC32.99■■■□□ 2.87
CDK11AQ9UQ88 AC091874.3-201ENST00000512672 1195 ntBASIC32.99■■■□□ 2.87
CDK11AQ9UQ88 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
CDK11AQ9UQ88 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CDK11AQ9UQ88 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC32.99■■■□□ 2.87
CDK11AQ9UQ88 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC32.98■■■□□ 2.87
CDK11AQ9UQ88 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC32.98■■■□□ 2.87
CDK11AQ9UQ88 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC32.98■■■□□ 2.87
CDK11AQ9UQ88 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC32.98■■■□□ 2.87
CDK11AQ9UQ88 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC32.98■■■□□ 2.87
CDK11AQ9UQ88 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC32.98■■■□□ 2.87
CDK11AQ9UQ88 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC32.98■■■□□ 2.87
CDK11AQ9UQ88 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CDK11AQ9UQ88 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CDK11AQ9UQ88 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC32.98■■■□□ 2.87
CDK11AQ9UQ88 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CDK11AQ9UQ88 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
CDK11AQ9UQ88 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
CDK11AQ9UQ88 PBX1-209ENST00000485769 834 ntTSL 2 BASIC32.97■■■□□ 2.87
CDK11AQ9UQ88 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
CDK11AQ9UQ88 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
CDK11AQ9UQ88 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC32.97■■■□□ 2.87
CDK11AQ9UQ88 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
CDK11AQ9UQ88 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
CDK11AQ9UQ88 PKM-204ENST00000449901 2526 ntTSL 2 BASIC32.96■■■□□ 2.87
CDK11AQ9UQ88 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC32.96■■■□□ 2.87
CDK11AQ9UQ88 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC32.96■■■□□ 2.87
CDK11AQ9UQ88 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
CDK11AQ9UQ88 ADM-205ENST00000528544 586 ntTSL 2 BASIC32.96■■■□□ 2.87
CDK11AQ9UQ88 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC32.96■■■□□ 2.87
CDK11AQ9UQ88 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC32.96■■■□□ 2.87
CDK11AQ9UQ88 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC32.96■■■□□ 2.87
CDK11AQ9UQ88 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
CDK11AQ9UQ88 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC32.95■■■□□ 2.87
CDK11AQ9UQ88 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC32.95■■■□□ 2.87
CDK11AQ9UQ88 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC32.95■■■□□ 2.87
CDK11AQ9UQ88 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC32.95■■■□□ 2.87
CDK11AQ9UQ88 BET1L-207ENST00000529614 560 ntTSL 5 BASIC32.95■■■□□ 2.87
CDK11AQ9UQ88 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC32.95■■■□□ 2.87
CDK11AQ9UQ88 RARG-204ENST00000543726 1779 ntTSL 2 BASIC32.95■■■□□ 2.87
CDK11AQ9UQ88 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
CDK11AQ9UQ88 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CDK11AQ9UQ88 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
CDK11AQ9UQ88 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC32.94■■■□□ 2.86
CDK11AQ9UQ88 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC32.94■■■□□ 2.86
CDK11AQ9UQ88 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC32.94■■■□□ 2.86
CDK11AQ9UQ88 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CDK11AQ9UQ88 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC32.93■■■□□ 2.86
CDK11AQ9UQ88 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC32.93■■■□□ 2.86
CDK11AQ9UQ88 AC139530.1-201ENST00000575312 1977 ntBASIC32.93■■■□□ 2.86
CDK11AQ9UQ88 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
CDK11AQ9UQ88 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
CDK11AQ9UQ88 CD44-222ENST00000526025 1052 ntTSL 2 BASIC32.93■■■□□ 2.86
CDK11AQ9UQ88 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC32.93■■■□□ 2.86
CDK11AQ9UQ88 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC32.93■■■□□ 2.86
CDK11AQ9UQ88 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
CDK11AQ9UQ88 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
CDK11AQ9UQ88 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
CDK11AQ9UQ88 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC32.92■■■□□ 2.86
CDK11AQ9UQ88 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC32.92■■■□□ 2.86
CDK11AQ9UQ88 ESRRAP1-201ENST00000400596 1257 ntBASIC32.92■■■□□ 2.86
CDK11AQ9UQ88 DUSP5P2-201ENST00000426873 1033 ntBASIC32.92■■■□□ 2.86
CDK11AQ9UQ88 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
CDK11AQ9UQ88 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC32.92■■■□□ 2.86
CDK11AQ9UQ88 IRX5-204ENST00000560154 879 ntTSL 5 BASIC32.92■■■□□ 2.86
CDK11AQ9UQ88 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC32.92■■■□□ 2.86
CDK11AQ9UQ88 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
CDK11AQ9UQ88 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
CDK11AQ9UQ88 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
CDK11AQ9UQ88 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
CDK11AQ9UQ88 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
CDK11AQ9UQ88 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC32.91■■■□□ 2.86
CDK11AQ9UQ88 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC32.91■■■□□ 2.86
CDK11AQ9UQ88 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC32.91■■■□□ 2.86
CDK11AQ9UQ88 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC32.91■■■□□ 2.86
CDK11AQ9UQ88 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
CDK11AQ9UQ88 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC32.91■■■□□ 2.86
CDK11AQ9UQ88 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CDK11AQ9UQ88 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC32.9■■■□□ 2.86
CDK11AQ9UQ88 GAS7-202ENST00000396115 929 ntTSL 5 BASIC32.9■■■□□ 2.86
CDK11AQ9UQ88 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC32.9■■■□□ 2.86
CDK11AQ9UQ88 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC32.9■■■□□ 2.86
CDK11AQ9UQ88 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC32.9■■■□□ 2.86
CDK11AQ9UQ88 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC32.9■■■□□ 2.86
CDK11AQ9UQ88 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
CDK11AQ9UQ88 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC32.9■■■□□ 2.86
CDK11AQ9UQ88 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms