Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
HDAC6Q9UBN7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.97■■□□□ 1.43
HDAC6Q9UBN7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.97■■□□□ 1.43
HDAC6Q9UBN7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
HDAC6Q9UBN7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
HDAC6Q9UBN7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.97■■□□□ 1.43
HDAC6Q9UBN7 AC055733.4-201ENST00000638462 1354 ntBASIC23.97■■□□□ 1.43
HDAC6Q9UBN7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
HDAC6Q9UBN7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
HDAC6Q9UBN7 AC137767.1-201ENST00000602918 1920 ntBASIC23.96■■□□□ 1.43
HDAC6Q9UBN7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
HDAC6Q9UBN7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.96■■□□□ 1.43
HDAC6Q9UBN7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.96■■□□□ 1.43
HDAC6Q9UBN7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
HDAC6Q9UBN7 DUX4L16-201ENST00000555130 1264 ntBASIC23.96■■□□□ 1.43
HDAC6Q9UBN7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.96■■□□□ 1.43
HDAC6Q9UBN7 AL050303.2-201ENST00000619798 666 ntBASIC23.96■■□□□ 1.43
HDAC6Q9UBN7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.96■■□□□ 1.43
HDAC6Q9UBN7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
HDAC6Q9UBN7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
HDAC6Q9UBN7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
HDAC6Q9UBN7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
HDAC6Q9UBN7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
HDAC6Q9UBN7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
HDAC6Q9UBN7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.95■■□□□ 1.42
HDAC6Q9UBN7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
HDAC6Q9UBN7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
HDAC6Q9UBN7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.95■■□□□ 1.42
HDAC6Q9UBN7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.95■■□□□ 1.42
HDAC6Q9UBN7 AP001160.3-201ENST00000601484 763 ntBASIC23.95■■□□□ 1.42
HDAC6Q9UBN7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.95■■□□□ 1.42
HDAC6Q9UBN7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
HDAC6Q9UBN7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.95■■□□□ 1.42
HDAC6Q9UBN7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.95■■□□□ 1.42
HDAC6Q9UBN7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
HDAC6Q9UBN7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
HDAC6Q9UBN7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
HDAC6Q9UBN7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
HDAC6Q9UBN7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
HDAC6Q9UBN7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.94■■□□□ 1.42
HDAC6Q9UBN7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.94■■□□□ 1.42
HDAC6Q9UBN7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.94■■□□□ 1.42
HDAC6Q9UBN7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
HDAC6Q9UBN7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
HDAC6Q9UBN7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
HDAC6Q9UBN7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.93■■□□□ 1.42
HDAC6Q9UBN7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.93■■□□□ 1.42
HDAC6Q9UBN7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.93■■□□□ 1.42
HDAC6Q9UBN7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.93■■□□□ 1.42
HDAC6Q9UBN7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.93■■□□□ 1.42
HDAC6Q9UBN7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
HDAC6Q9UBN7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.93■■□□□ 1.42
HDAC6Q9UBN7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.92■■□□□ 1.42
HDAC6Q9UBN7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
HDAC6Q9UBN7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
HDAC6Q9UBN7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
HDAC6Q9UBN7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
HDAC6Q9UBN7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
HDAC6Q9UBN7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.92■■□□□ 1.42
HDAC6Q9UBN7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
HDAC6Q9UBN7 AC231657.2-201ENST00000624556 255 ntBASIC23.92■■□□□ 1.42
HDAC6Q9UBN7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.92■■□□□ 1.42
HDAC6Q9UBN7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
HDAC6Q9UBN7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.92■■□□□ 1.42
HDAC6Q9UBN7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
HDAC6Q9UBN7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
HDAC6Q9UBN7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
HDAC6Q9UBN7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
HDAC6Q9UBN7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.91■■□□□ 1.42
HDAC6Q9UBN7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
HDAC6Q9UBN7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.91■■□□□ 1.42
HDAC6Q9UBN7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.91■■□□□ 1.42
HDAC6Q9UBN7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
HDAC6Q9UBN7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.91■■□□□ 1.42
HDAC6Q9UBN7 MYCNOS-205ENST00000641950 531 ntBASIC23.91■■□□□ 1.42
HDAC6Q9UBN7 AP004607.7-201ENST00000527152 1677 ntBASIC23.91■■□□□ 1.42
HDAC6Q9UBN7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
HDAC6Q9UBN7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.91■■□□□ 1.42
HDAC6Q9UBN7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HDAC6Q9UBN7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HDAC6Q9UBN7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.9■■□□□ 1.42
HDAC6Q9UBN7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.9■■□□□ 1.42
HDAC6Q9UBN7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HDAC6Q9UBN7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HDAC6Q9UBN7 AC007322.1-201ENST00000426983 750 ntBASIC23.9■■□□□ 1.42
HDAC6Q9UBN7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
HDAC6Q9UBN7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.9■■□□□ 1.42
HDAC6Q9UBN7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.9■■□□□ 1.42
HDAC6Q9UBN7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
HDAC6Q9UBN7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.9■■□□□ 1.42
HDAC6Q9UBN7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.9■■□□□ 1.42
HDAC6Q9UBN7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.9■■□□□ 1.42
HDAC6Q9UBN7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.9■■□□□ 1.42
HDAC6Q9UBN7 AL121832.2-201ENST00000610979 668 ntBASIC23.9■■□□□ 1.42
HDAC6Q9UBN7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.9■■□□□ 1.42
HDAC6Q9UBN7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HDAC6Q9UBN7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
HDAC6Q9UBN7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HDAC6Q9UBN7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
HDAC6Q9UBN7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.89■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms