Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.13■□□□□ 0.97
NCDNQ9UBB6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.13■□□□□ 0.97
NCDNQ9UBB6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCDNQ9UBB6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCDNQ9UBB6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCDNQ9UBB6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCDNQ9UBB6 RPPH1-201ENST00000516869 333 ntBASIC21.12■□□□□ 0.97
NCDNQ9UBB6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.12■□□□□ 0.97
NCDNQ9UBB6 AC120498.10-201ENST00000621827 505 ntBASIC21.12■□□□□ 0.97
NCDNQ9UBB6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCDNQ9UBB6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.12■□□□□ 0.97
NCDNQ9UBB6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCDNQ9UBB6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCDNQ9UBB6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.12■□□□□ 0.97
NCDNQ9UBB6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCDNQ9UBB6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NCDNQ9UBB6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCDNQ9UBB6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCDNQ9UBB6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCDNQ9UBB6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NCDNQ9UBB6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NCDNQ9UBB6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCDNQ9UBB6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
NCDNQ9UBB6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCDNQ9UBB6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NCDNQ9UBB6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.11■□□□□ 0.97
NCDNQ9UBB6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.11■□□□□ 0.97
NCDNQ9UBB6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
NCDNQ9UBB6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
NCDNQ9UBB6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.11■□□□□ 0.97
NCDNQ9UBB6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.11■□□□□ 0.97
NCDNQ9UBB6 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.11■□□□□ 0.97
NCDNQ9UBB6 LINC01124-201ENST00000409786 2117 ntBASIC21.11■□□□□ 0.97
NCDNQ9UBB6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.11■□□□□ 0.97
NCDNQ9UBB6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.1■□□□□ 0.97
NCDNQ9UBB6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NCDNQ9UBB6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCDNQ9UBB6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCDNQ9UBB6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCDNQ9UBB6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NCDNQ9UBB6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCDNQ9UBB6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCDNQ9UBB6 LSM12P1-201ENST00000411836 588 ntBASIC21.1■□□□□ 0.97
NCDNQ9UBB6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
NCDNQ9UBB6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.1■□□□□ 0.97
NCDNQ9UBB6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.1■□□□□ 0.97
NCDNQ9UBB6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.1■□□□□ 0.97
NCDNQ9UBB6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.1■□□□□ 0.97
NCDNQ9UBB6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.1■□□□□ 0.97
NCDNQ9UBB6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCDNQ9UBB6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCDNQ9UBB6 AL353803.4-201ENST00000565882 1934 ntBASIC21.1■□□□□ 0.97
NCDNQ9UBB6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCDNQ9UBB6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
NCDNQ9UBB6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.09■□□□□ 0.97
NCDNQ9UBB6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
NCDNQ9UBB6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCDNQ9UBB6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCDNQ9UBB6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCDNQ9UBB6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCDNQ9UBB6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCDNQ9UBB6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NCDNQ9UBB6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NCDNQ9UBB6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NCDNQ9UBB6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NCDNQ9UBB6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.09■□□□□ 0.97
NCDNQ9UBB6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.09■□□□□ 0.97
NCDNQ9UBB6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NCDNQ9UBB6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.09■□□□□ 0.97
NCDNQ9UBB6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NCDNQ9UBB6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCDNQ9UBB6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCDNQ9UBB6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.09■□□□□ 0.97
NCDNQ9UBB6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
NCDNQ9UBB6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NCDNQ9UBB6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.08■□□□□ 0.97
NCDNQ9UBB6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.08■□□□□ 0.97
NCDNQ9UBB6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.08■□□□□ 0.97
NCDNQ9UBB6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NCDNQ9UBB6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.08■□□□□ 0.97
NCDNQ9UBB6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NCDNQ9UBB6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.08■□□□□ 0.97
NCDNQ9UBB6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.08■□□□□ 0.97
NCDNQ9UBB6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.08■□□□□ 0.97
NCDNQ9UBB6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.08■□□□□ 0.97
NCDNQ9UBB6 Z99916.2-201ENST00000604037 246 ntBASIC21.08■□□□□ 0.97
NCDNQ9UBB6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
NCDNQ9UBB6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.08■□□□□ 0.97
NCDNQ9UBB6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
NCDNQ9UBB6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.08■□□□□ 0.96
NCDNQ9UBB6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NCDNQ9UBB6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.07■□□□□ 0.96
NCDNQ9UBB6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NCDNQ9UBB6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NCDNQ9UBB6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.07■□□□□ 0.96
NCDNQ9UBB6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.07■□□□□ 0.96
NCDNQ9UBB6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.07■□□□□ 0.96
NCDNQ9UBB6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NCDNQ9UBB6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NCDNQ9UBB6 CYP2T3P-201ENST00000601990 817 ntBASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms