Protein–RNA interactions for Protein: Q9NUQ9

FAM49B, Protein FAM49B, humanhuman

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49BQ9NUQ9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
FAM49BQ9NUQ9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.56■■□□□ 1.2
FAM49BQ9NUQ9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FAM49BQ9NUQ9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
FAM49BQ9NUQ9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
FAM49BQ9NUQ9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.56■■□□□ 1.2
FAM49BQ9NUQ9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.56■■□□□ 1.2
FAM49BQ9NUQ9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.56■■□□□ 1.2
FAM49BQ9NUQ9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
FAM49BQ9NUQ9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
FAM49BQ9NUQ9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FAM49BQ9NUQ9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FAM49BQ9NUQ9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
FAM49BQ9NUQ9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FAM49BQ9NUQ9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FAM49BQ9NUQ9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
FAM49BQ9NUQ9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
FAM49BQ9NUQ9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.55■■□□□ 1.2
FAM49BQ9NUQ9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
FAM49BQ9NUQ9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.55■■□□□ 1.2
FAM49BQ9NUQ9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
FAM49BQ9NUQ9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
FAM49BQ9NUQ9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.55■■□□□ 1.2
FAM49BQ9NUQ9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.55■■□□□ 1.2
FAM49BQ9NUQ9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.55■■□□□ 1.2
FAM49BQ9NUQ9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.55■■□□□ 1.2
FAM49BQ9NUQ9 AC104564.3-201ENST00000582367 638 ntBASIC22.55■■□□□ 1.2
FAM49BQ9NUQ9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
FAM49BQ9NUQ9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
FAM49BQ9NUQ9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
FAM49BQ9NUQ9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
FAM49BQ9NUQ9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FAM49BQ9NUQ9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FAM49BQ9NUQ9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
FAM49BQ9NUQ9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.54■■□□□ 1.2
FAM49BQ9NUQ9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
FAM49BQ9NUQ9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
FAM49BQ9NUQ9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FAM49BQ9NUQ9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
FAM49BQ9NUQ9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
FAM49BQ9NUQ9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.53■■□□□ 1.2
FAM49BQ9NUQ9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
FAM49BQ9NUQ9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
FAM49BQ9NUQ9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.53■■□□□ 1.2
FAM49BQ9NUQ9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.53■■□□□ 1.2
FAM49BQ9NUQ9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.53■■□□□ 1.2
FAM49BQ9NUQ9 AC022517.1-201ENST00000592429 346 ntBASIC22.53■■□□□ 1.2
FAM49BQ9NUQ9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
FAM49BQ9NUQ9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
FAM49BQ9NUQ9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
FAM49BQ9NUQ9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.52■■□□□ 1.2
FAM49BQ9NUQ9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
FAM49BQ9NUQ9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
FAM49BQ9NUQ9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
FAM49BQ9NUQ9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
FAM49BQ9NUQ9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
FAM49BQ9NUQ9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.52■■□□□ 1.2
FAM49BQ9NUQ9 EEF1DP3-203ENST00000566025 782 ntBASIC22.52■■□□□ 1.2
FAM49BQ9NUQ9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
FAM49BQ9NUQ9 IKBKGP1-201ENST00000612193 1073 ntBASIC22.52■■□□□ 1.2
FAM49BQ9NUQ9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
FAM49BQ9NUQ9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.52■■□□□ 1.2
FAM49BQ9NUQ9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
FAM49BQ9NUQ9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.52■■□□□ 1.2
FAM49BQ9NUQ9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.52■■□□□ 1.2
FAM49BQ9NUQ9 FBXW4P1-201ENST00000426721 2239 ntBASIC22.51■■□□□ 1.19
FAM49BQ9NUQ9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
FAM49BQ9NUQ9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
FAM49BQ9NUQ9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.51■■□□□ 1.19
FAM49BQ9NUQ9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
FAM49BQ9NUQ9 KRT19P1-201ENST00000405746 1186 ntBASIC22.51■■□□□ 1.19
FAM49BQ9NUQ9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.51■■□□□ 1.19
FAM49BQ9NUQ9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.51■■□□□ 1.19
FAM49BQ9NUQ9 AC092666.2-201ENST00000613287 246 ntBASIC22.51■■□□□ 1.19
FAM49BQ9NUQ9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
FAM49BQ9NUQ9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
FAM49BQ9NUQ9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
FAM49BQ9NUQ9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.5■■□□□ 1.19
FAM49BQ9NUQ9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.5■■□□□ 1.19
FAM49BQ9NUQ9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
FAM49BQ9NUQ9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
FAM49BQ9NUQ9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.5■■□□□ 1.19
FAM49BQ9NUQ9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
FAM49BQ9NUQ9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.5■■□□□ 1.19
FAM49BQ9NUQ9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.5■■□□□ 1.19
FAM49BQ9NUQ9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.5■■□□□ 1.19
FAM49BQ9NUQ9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.5■■□□□ 1.19
FAM49BQ9NUQ9 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.5■■□□□ 1.19
FAM49BQ9NUQ9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.5■■□□□ 1.19
FAM49BQ9NUQ9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.5■■□□□ 1.19
FAM49BQ9NUQ9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
FAM49BQ9NUQ9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.5■■□□□ 1.19
FAM49BQ9NUQ9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
FAM49BQ9NUQ9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
FAM49BQ9NUQ9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
FAM49BQ9NUQ9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.5■■□□□ 1.19
FAM49BQ9NUQ9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
FAM49BQ9NUQ9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
FAM49BQ9NUQ9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
FAM49BQ9NUQ9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms