Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ECHDC1Q9NTX5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC25.92■■□□□ 1.74
ECHDC1Q9NTX5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
ECHDC1Q9NTX5 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC25.92■■□□□ 1.74
ECHDC1Q9NTX5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.92■■□□□ 1.74
ECHDC1Q9NTX5 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ECHDC1Q9NTX5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
ECHDC1Q9NTX5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ECHDC1Q9NTX5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
ECHDC1Q9NTX5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
ECHDC1Q9NTX5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ECHDC1Q9NTX5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ECHDC1Q9NTX5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC25.91■■□□□ 1.74
ECHDC1Q9NTX5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC25.91■■□□□ 1.74
ECHDC1Q9NTX5 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ECHDC1Q9NTX5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
ECHDC1Q9NTX5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ECHDC1Q9NTX5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC25.91■■□□□ 1.74
ECHDC1Q9NTX5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
ECHDC1Q9NTX5 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ECHDC1Q9NTX5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.91■■□□□ 1.74
ECHDC1Q9NTX5 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC25.91■■□□□ 1.74
ECHDC1Q9NTX5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ECHDC1Q9NTX5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC25.91■■□□□ 1.74
ECHDC1Q9NTX5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
ECHDC1Q9NTX5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
ECHDC1Q9NTX5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ECHDC1Q9NTX5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC25.9■■□□□ 1.74
ECHDC1Q9NTX5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
ECHDC1Q9NTX5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
ECHDC1Q9NTX5 AC034268.1-201ENST00000441047 882 ntBASIC25.9■■□□□ 1.74
ECHDC1Q9NTX5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.9■■□□□ 1.74
ECHDC1Q9NTX5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC25.9■■□□□ 1.74
ECHDC1Q9NTX5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC25.9■■□□□ 1.74
ECHDC1Q9NTX5 AC053503.5-201ENST00000601508 636 ntBASIC25.9■■□□□ 1.74
ECHDC1Q9NTX5 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
ECHDC1Q9NTX5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ECHDC1Q9NTX5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ECHDC1Q9NTX5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ECHDC1Q9NTX5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ECHDC1Q9NTX5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ECHDC1Q9NTX5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ECHDC1Q9NTX5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ECHDC1Q9NTX5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ECHDC1Q9NTX5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
ECHDC1Q9NTX5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
ECHDC1Q9NTX5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
ECHDC1Q9NTX5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
ECHDC1Q9NTX5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
ECHDC1Q9NTX5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
ECHDC1Q9NTX5 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
ECHDC1Q9NTX5 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC25.89■■□□□ 1.74
ECHDC1Q9NTX5 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
ECHDC1Q9NTX5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC25.89■■□□□ 1.74
ECHDC1Q9NTX5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
ECHDC1Q9NTX5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC25.89■■□□□ 1.74
ECHDC1Q9NTX5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
ECHDC1Q9NTX5 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
ECHDC1Q9NTX5 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
ECHDC1Q9NTX5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
ECHDC1Q9NTX5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
ECHDC1Q9NTX5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ECHDC1Q9NTX5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
ECHDC1Q9NTX5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC25.88■■□□□ 1.73
ECHDC1Q9NTX5 COX20-201ENST00000366528 568 ntTSL 2 BASIC25.88■■□□□ 1.73
ECHDC1Q9NTX5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
ECHDC1Q9NTX5 MIR935-201ENST00000401179 91 ntBASIC25.88■■□□□ 1.73
ECHDC1Q9NTX5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC25.88■■□□□ 1.73
ECHDC1Q9NTX5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.88■■□□□ 1.73
ECHDC1Q9NTX5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC25.88■■□□□ 1.73
ECHDC1Q9NTX5 KRT18P61-201ENST00000585825 1298 ntBASIC25.88■■□□□ 1.73
ECHDC1Q9NTX5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC25.88■■□□□ 1.73
ECHDC1Q9NTX5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
ECHDC1Q9NTX5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
ECHDC1Q9NTX5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ECHDC1Q9NTX5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.88■■□□□ 1.73
ECHDC1Q9NTX5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC25.87■■□□□ 1.73
ECHDC1Q9NTX5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
ECHDC1Q9NTX5 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ECHDC1Q9NTX5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ECHDC1Q9NTX5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ECHDC1Q9NTX5 AP004607.4-201ENST00000530158 1459 ntBASIC25.87■■□□□ 1.73
ECHDC1Q9NTX5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
ECHDC1Q9NTX5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ECHDC1Q9NTX5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ECHDC1Q9NTX5 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
ECHDC1Q9NTX5 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ECHDC1Q9NTX5 AC004854.2-201ENST00000608450 1441 ntBASIC25.87■■□□□ 1.73
ECHDC1Q9NTX5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
ECHDC1Q9NTX5 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ECHDC1Q9NTX5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
ECHDC1Q9NTX5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ECHDC1Q9NTX5 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.86■■□□□ 1.73
ECHDC1Q9NTX5 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
ECHDC1Q9NTX5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
ECHDC1Q9NTX5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC25.86■■□□□ 1.73
ECHDC1Q9NTX5 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC25.86■■□□□ 1.73
ECHDC1Q9NTX5 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ECHDC1Q9NTX5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
ECHDC1Q9NTX5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms