Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.51■□□□□ 0.71
UBQLN4Q9NRR5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.51■□□□□ 0.71
UBQLN4Q9NRR5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
UBQLN4Q9NRR5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.51■□□□□ 0.71
UBQLN4Q9NRR5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN4Q9NRR5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.51■□□□□ 0.71
UBQLN4Q9NRR5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN4Q9NRR5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN4Q9NRR5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
UBQLN4Q9NRR5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
UBQLN4Q9NRR5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN4Q9NRR5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN4Q9NRR5 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN4Q9NRR5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.5■□□□□ 0.71
UBQLN4Q9NRR5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN4Q9NRR5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN4Q9NRR5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.5■□□□□ 0.71
UBQLN4Q9NRR5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.5■□□□□ 0.71
UBQLN4Q9NRR5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN4Q9NRR5 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.5■□□□□ 0.71
UBQLN4Q9NRR5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN4Q9NRR5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.5■□□□□ 0.71
UBQLN4Q9NRR5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN4Q9NRR5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
UBQLN4Q9NRR5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
UBQLN4Q9NRR5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN4Q9NRR5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN4Q9NRR5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBQLN4Q9NRR5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
UBQLN4Q9NRR5 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBQLN4Q9NRR5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBQLN4Q9NRR5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBQLN4Q9NRR5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBQLN4Q9NRR5 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
UBQLN4Q9NRR5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.49■□□□□ 0.71
UBQLN4Q9NRR5 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.49■□□□□ 0.71
UBQLN4Q9NRR5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
UBQLN4Q9NRR5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.49■□□□□ 0.71
UBQLN4Q9NRR5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBQLN4Q9NRR5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
UBQLN4Q9NRR5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.49■□□□□ 0.71
UBQLN4Q9NRR5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBQLN4Q9NRR5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBQLN4Q9NRR5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.49■□□□□ 0.71
UBQLN4Q9NRR5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBQLN4Q9NRR5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN4Q9NRR5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN4Q9NRR5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN4Q9NRR5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN4Q9NRR5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
UBQLN4Q9NRR5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.48■□□□□ 0.71
UBQLN4Q9NRR5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN4Q9NRR5 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN4Q9NRR5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN4Q9NRR5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN4Q9NRR5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN4Q9NRR5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN4Q9NRR5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN4Q9NRR5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN4Q9NRR5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN4Q9NRR5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN4Q9NRR5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN4Q9NRR5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN4Q9NRR5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN4Q9NRR5 AC079140.4-201ENST00000507448 529 ntBASIC19.47■□□□□ 0.71
UBQLN4Q9NRR5 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.47■□□□□ 0.71
UBQLN4Q9NRR5 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.47■□□□□ 0.71
UBQLN4Q9NRR5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.47■□□□□ 0.71
UBQLN4Q9NRR5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN4Q9NRR5 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN4Q9NRR5 Z98882.1-201ENST00000622160 2253 ntBASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN4Q9NRR5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
UBQLN4Q9NRR5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN4Q9NRR5 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms