Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 AL353803.4-201ENST00000565882 1934 ntBASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 AP000974.1-201ENST00000623909 2387 ntBASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMCO4Q9NRQ5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SMCO4Q9NRQ5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMCO4Q9NRQ5 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMCO4Q9NRQ5 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SMCO4Q9NRQ5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMCO4Q9NRQ5 OXCT2P1-201ENST00000447263 1535 ntBASIC16.69■□□□□ 0.26
SMCO4Q9NRQ5 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMCO4Q9NRQ5 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMCO4Q9NRQ5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.69■□□□□ 0.26
SMCO4Q9NRQ5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.69■□□□□ 0.26
SMCO4Q9NRQ5 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMCO4Q9NRQ5 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC16.68■□□□□ 0.26
SMCO4Q9NRQ5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMCO4Q9NRQ5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SMCO4Q9NRQ5 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMCO4Q9NRQ5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMCO4Q9NRQ5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SMCO4Q9NRQ5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMCO4Q9NRQ5 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SMCO4Q9NRQ5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMCO4Q9NRQ5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.68■□□□□ 0.26
SMCO4Q9NRQ5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SMCO4Q9NRQ5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMCO4Q9NRQ5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.68■□□□□ 0.26
SMCO4Q9NRQ5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMCO4Q9NRQ5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.67■□□□□ 0.26
SMCO4Q9NRQ5 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SMCO4Q9NRQ5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMCO4Q9NRQ5 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMCO4Q9NRQ5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.67■□□□□ 0.26
SMCO4Q9NRQ5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMCO4Q9NRQ5 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SMCO4Q9NRQ5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMCO4Q9NRQ5 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SMCO4Q9NRQ5 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.67■□□□□ 0.26
SMCO4Q9NRQ5 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC16.67■□□□□ 0.26
SMCO4Q9NRQ5 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SMCO4Q9NRQ5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMCO4Q9NRQ5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMCO4Q9NRQ5 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SMCO4Q9NRQ5 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMCO4Q9NRQ5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMCO4Q9NRQ5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.67■□□□□ 0.26
SMCO4Q9NRQ5 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMCO4Q9NRQ5 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.66■□□□□ 0.26
SMCO4Q9NRQ5 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMCO4Q9NRQ5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMCO4Q9NRQ5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMCO4Q9NRQ5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMCO4Q9NRQ5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMCO4Q9NRQ5 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMCO4Q9NRQ5 CIB2-204ENST00000557846 934 ntTSL 3 BASIC16.66■□□□□ 0.26
SMCO4Q9NRQ5 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMCO4Q9NRQ5 AC073314.1-201ENST00000568729 2216 ntBASIC16.66■□□□□ 0.26
SMCO4Q9NRQ5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMCO4Q9NRQ5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMCO4Q9NRQ5 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMCO4Q9NRQ5 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
SMCO4Q9NRQ5 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMCO4Q9NRQ5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMCO4Q9NRQ5 AC120498.9-201ENST00000339021 3867 ntBASIC16.66■□□□□ 0.26
SMCO4Q9NRQ5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMCO4Q9NRQ5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SMCO4Q9NRQ5 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SMCO4Q9NRQ5 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMCO4Q9NRQ5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMCO4Q9NRQ5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.65■□□□□ 0.26
SMCO4Q9NRQ5 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SMCO4Q9NRQ5 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMCO4Q9NRQ5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMCO4Q9NRQ5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMCO4Q9NRQ5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMCO4Q9NRQ5 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMCO4Q9NRQ5 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
SMCO4Q9NRQ5 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SMCO4Q9NRQ5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMCO4Q9NRQ5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMCO4Q9NRQ5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.65■□□□□ 0.26
SMCO4Q9NRQ5 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMCO4Q9NRQ5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.64■□□□□ 0.26
SMCO4Q9NRQ5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SMCO4Q9NRQ5 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SMCO4Q9NRQ5 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms