Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MIPEPP3-201ENST00000412105 444 ntBASIC23.88■■□□□ 1.41
PDLIM7Q9NR12 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.88■■□□□ 1.41
PDLIM7Q9NR12 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.88■■□□□ 1.41
PDLIM7Q9NR12 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDLIM7Q9NR12 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDLIM7Q9NR12 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDLIM7Q9NR12 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.88■■□□□ 1.41
PDLIM7Q9NR12 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PDLIM7Q9NR12 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.88■■□□□ 1.41
PDLIM7Q9NR12 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
PDLIM7Q9NR12 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDLIM7Q9NR12 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.87■■□□□ 1.41
PDLIM7Q9NR12 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDLIM7Q9NR12 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
PDLIM7Q9NR12 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDLIM7Q9NR12 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDLIM7Q9NR12 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PDLIM7Q9NR12 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
PDLIM7Q9NR12 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDLIM7Q9NR12 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDLIM7Q9NR12 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.87■■□□□ 1.41
PDLIM7Q9NR12 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDLIM7Q9NR12 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.87■■□□□ 1.41
PDLIM7Q9NR12 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PDLIM7Q9NR12 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDLIM7Q9NR12 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PDLIM7Q9NR12 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.87■■□□□ 1.41
PDLIM7Q9NR12 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.87■■□□□ 1.41
PDLIM7Q9NR12 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDLIM7Q9NR12 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDLIM7Q9NR12 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDLIM7Q9NR12 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDLIM7Q9NR12 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
PDLIM7Q9NR12 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PDLIM7Q9NR12 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
PDLIM7Q9NR12 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDLIM7Q9NR12 AP004607.7-201ENST00000527152 1677 ntBASIC23.86■■□□□ 1.41
PDLIM7Q9NR12 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.86■■□□□ 1.41
PDLIM7Q9NR12 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.86■■□□□ 1.41
PDLIM7Q9NR12 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PDLIM7Q9NR12 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PDLIM7Q9NR12 DUSP5P2-201ENST00000426873 1033 ntBASIC23.86■■□□□ 1.41
PDLIM7Q9NR12 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.86■■□□□ 1.41
PDLIM7Q9NR12 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
PDLIM7Q9NR12 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDLIM7Q9NR12 AC055733.4-201ENST00000638462 1354 ntBASIC23.86■■□□□ 1.41
PDLIM7Q9NR12 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PDLIM7Q9NR12 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PDLIM7Q9NR12 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PDLIM7Q9NR12 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDLIM7Q9NR12 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.85■■□□□ 1.41
PDLIM7Q9NR12 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.85■■□□□ 1.41
PDLIM7Q9NR12 CYP2T1P-201ENST00000432607 1285 ntBASIC23.85■■□□□ 1.41
PDLIM7Q9NR12 AC010141.2-201ENST00000452426 721 ntBASIC23.85■■□□□ 1.41
PDLIM7Q9NR12 RARRES2P4-201ENST00000514074 484 ntBASIC23.85■■□□□ 1.41
PDLIM7Q9NR12 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
PDLIM7Q9NR12 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.85■■□□□ 1.41
PDLIM7Q9NR12 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
PDLIM7Q9NR12 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.85■■□□□ 1.41
PDLIM7Q9NR12 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.85■■□□□ 1.41
PDLIM7Q9NR12 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
PDLIM7Q9NR12 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
PDLIM7Q9NR12 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.85■■□□□ 1.41
PDLIM7Q9NR12 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PDLIM7Q9NR12 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.85■■□□□ 1.41
PDLIM7Q9NR12 MKRN4P-201ENST00000444706 1521 ntBASIC23.84■■□□□ 1.41
PDLIM7Q9NR12 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDLIM7Q9NR12 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDLIM7Q9NR12 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDLIM7Q9NR12 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.84■■□□□ 1.41
PDLIM7Q9NR12 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.84■■□□□ 1.41
PDLIM7Q9NR12 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.84■■□□□ 1.41
PDLIM7Q9NR12 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.84■■□□□ 1.41
PDLIM7Q9NR12 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.84■■□□□ 1.41
PDLIM7Q9NR12 AC013268.1-206ENST00000638368 961 ntBASIC23.84■■□□□ 1.41
PDLIM7Q9NR12 AC112229.1-201ENST00000639295 961 ntBASIC23.84■■□□□ 1.41
PDLIM7Q9NR12 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
PDLIM7Q9NR12 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PDLIM7Q9NR12 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.84■■□□□ 1.41
PDLIM7Q9NR12 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.84■■□□□ 1.41
PDLIM7Q9NR12 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
PDLIM7Q9NR12 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PDLIM7Q9NR12 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PDLIM7Q9NR12 GCSHP5-201ENST00000443090 522 ntBASIC23.83■■□□□ 1.41
PDLIM7Q9NR12 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.83■■□□□ 1.41
PDLIM7Q9NR12 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.83■■□□□ 1.41
PDLIM7Q9NR12 KRT18P20-201ENST00000548986 1279 ntBASIC23.83■■□□□ 1.41
PDLIM7Q9NR12 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.83■■□□□ 1.41
PDLIM7Q9NR12 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.83■■□□□ 1.41
PDLIM7Q9NR12 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PDLIM7Q9NR12 AP006294.2-201ENST00000641667 209 ntBASIC23.83■■□□□ 1.41
PDLIM7Q9NR12 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
PDLIM7Q9NR12 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PDLIM7Q9NR12 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.83■■□□□ 1.4
PDLIM7Q9NR12 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
PDLIM7Q9NR12 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
PDLIM7Q9NR12 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.83■■□□□ 1.4
PDLIM7Q9NR12 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PDLIM7Q9NR12 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.82■■□□□ 1.4
PDLIM7Q9NR12 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms