Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.77■■□□□ 1.08
ATP13A1Q9HD20 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
ATP13A1Q9HD20 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATP13A1Q9HD20 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP13A1Q9HD20 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.77■■□□□ 1.08
ATP13A1Q9HD20 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP13A1Q9HD20 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.08
ATP13A1Q9HD20 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.77■■□□□ 1.08
ATP13A1Q9HD20 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ATP13A1Q9HD20 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP13A1Q9HD20 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.76■■□□□ 1.07
ATP13A1Q9HD20 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP13A1Q9HD20 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP13A1Q9HD20 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP13A1Q9HD20 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATP13A1Q9HD20 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.76■■□□□ 1.07
ATP13A1Q9HD20 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.76■■□□□ 1.07
ATP13A1Q9HD20 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.76■■□□□ 1.07
ATP13A1Q9HD20 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP13A1Q9HD20 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP13A1Q9HD20 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP13A1Q9HD20 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP13A1Q9HD20 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ATP13A1Q9HD20 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
ATP13A1Q9HD20 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP13A1Q9HD20 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP13A1Q9HD20 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATP13A1Q9HD20 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.75■■□□□ 1.07
ATP13A1Q9HD20 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
ATP13A1Q9HD20 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.75■■□□□ 1.07
ATP13A1Q9HD20 AC104187.1-201ENST00000607510 612 ntBASIC21.75■■□□□ 1.07
ATP13A1Q9HD20 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP13A1Q9HD20 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATP13A1Q9HD20 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATP13A1Q9HD20 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
ATP13A1Q9HD20 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
ATP13A1Q9HD20 AC003102.1-202ENST00000563394 1796 ntBASIC21.74■■□□□ 1.07
ATP13A1Q9HD20 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP13A1Q9HD20 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP13A1Q9HD20 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP13A1Q9HD20 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP13A1Q9HD20 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP13A1Q9HD20 KRT19P1-201ENST00000405746 1186 ntBASIC21.74■■□□□ 1.07
ATP13A1Q9HD20 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.74■■□□□ 1.07
ATP13A1Q9HD20 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.74■■□□□ 1.07
ATP13A1Q9HD20 AC022517.1-201ENST00000592429 346 ntBASIC21.74■■□□□ 1.07
ATP13A1Q9HD20 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP13A1Q9HD20 AC092666.2-201ENST00000613287 246 ntBASIC21.74■■□□□ 1.07
ATP13A1Q9HD20 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP13A1Q9HD20 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP13A1Q9HD20 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP13A1Q9HD20 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP13A1Q9HD20 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.74■■□□□ 1.07
ATP13A1Q9HD20 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATP13A1Q9HD20 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP13A1Q9HD20 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.73■■□□□ 1.07
ATP13A1Q9HD20 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP13A1Q9HD20 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.73■■□□□ 1.07
ATP13A1Q9HD20 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP13A1Q9HD20 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP13A1Q9HD20 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP13A1Q9HD20 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP13A1Q9HD20 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
ATP13A1Q9HD20 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.72■■□□□ 1.07
ATP13A1Q9HD20 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.72■■□□□ 1.07
ATP13A1Q9HD20 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATP13A1Q9HD20 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.72■■□□□ 1.07
ATP13A1Q9HD20 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
ATP13A1Q9HD20 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATP13A1Q9HD20 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP13A1Q9HD20 AC010542.4-201ENST00000563151 1910 ntBASIC21.72■■□□□ 1.07
ATP13A1Q9HD20 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP13A1Q9HD20 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP13A1Q9HD20 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP13A1Q9HD20 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
ATP13A1Q9HD20 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP13A1Q9HD20 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP13A1Q9HD20 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP13A1Q9HD20 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP13A1Q9HD20 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ATP13A1Q9HD20 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
ATP13A1Q9HD20 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP13A1Q9HD20 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP13A1Q9HD20 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.71■■□□□ 1.07
ATP13A1Q9HD20 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.71■■□□□ 1.07
ATP13A1Q9HD20 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP13A1Q9HD20 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP13A1Q9HD20 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.71■■□□□ 1.07
ATP13A1Q9HD20 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
ATP13A1Q9HD20 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.07
ATP13A1Q9HD20 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
ATP13A1Q9HD20 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP13A1Q9HD20 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP13A1Q9HD20 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP13A1Q9HD20 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP13A1Q9HD20 EEF1DP3-203ENST00000566025 782 ntBASIC21.7■■□□□ 1.06
ATP13A1Q9HD20 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP13A1Q9HD20 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.7■■□□□ 1.06
ATP13A1Q9HD20 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATP13A1Q9HD20 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms