Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
RC3H2Q9HBD1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RC3H2Q9HBD1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RC3H2Q9HBD1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
RC3H2Q9HBD1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.81■■□□□ 1.24
RC3H2Q9HBD1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.81■■□□□ 1.24
RC3H2Q9HBD1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RC3H2Q9HBD1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
RC3H2Q9HBD1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RC3H2Q9HBD1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC22.81■■□□□ 1.24
RC3H2Q9HBD1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.81■■□□□ 1.24
RC3H2Q9HBD1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC22.81■■□□□ 1.24
RC3H2Q9HBD1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.81■■□□□ 1.24
RC3H2Q9HBD1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.81■■□□□ 1.24
RC3H2Q9HBD1 AL591742.1-201ENST00000604433 565 ntBASIC22.81■■□□□ 1.24
RC3H2Q9HBD1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
RC3H2Q9HBD1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RC3H2Q9HBD1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.81■■□□□ 1.24
RC3H2Q9HBD1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RC3H2Q9HBD1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.8■■□□□ 1.24
RC3H2Q9HBD1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.8■■□□□ 1.24
RC3H2Q9HBD1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RC3H2Q9HBD1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
RC3H2Q9HBD1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.8■■□□□ 1.24
RC3H2Q9HBD1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RC3H2Q9HBD1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RC3H2Q9HBD1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.8■■□□□ 1.24
RC3H2Q9HBD1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
RC3H2Q9HBD1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RC3H2Q9HBD1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RC3H2Q9HBD1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.79■■□□□ 1.24
RC3H2Q9HBD1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC22.79■■□□□ 1.24
RC3H2Q9HBD1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.79■■□□□ 1.24
RC3H2Q9HBD1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.78■■□□□ 1.24
RC3H2Q9HBD1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
RC3H2Q9HBD1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RC3H2Q9HBD1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
RC3H2Q9HBD1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.78■■□□□ 1.24
RC3H2Q9HBD1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
RC3H2Q9HBD1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RC3H2Q9HBD1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC22.78■■□□□ 1.24
RC3H2Q9HBD1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RC3H2Q9HBD1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.78■■□□□ 1.24
RC3H2Q9HBD1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
RC3H2Q9HBD1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RC3H2Q9HBD1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RC3H2Q9HBD1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.78■■□□□ 1.24
RC3H2Q9HBD1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.77■■□□□ 1.24
RC3H2Q9HBD1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.77■■□□□ 1.24
RC3H2Q9HBD1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
RC3H2Q9HBD1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
RC3H2Q9HBD1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
RC3H2Q9HBD1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.77■■□□□ 1.24
RC3H2Q9HBD1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.77■■□□□ 1.24
RC3H2Q9HBD1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RC3H2Q9HBD1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
RC3H2Q9HBD1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC22.77■■□□□ 1.24
RC3H2Q9HBD1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
RC3H2Q9HBD1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
RC3H2Q9HBD1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC22.77■■□□□ 1.24
RC3H2Q9HBD1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.77■■□□□ 1.24
RC3H2Q9HBD1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RC3H2Q9HBD1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
RC3H2Q9HBD1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RC3H2Q9HBD1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RC3H2Q9HBD1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
RC3H2Q9HBD1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.76■■□□□ 1.23
RC3H2Q9HBD1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.76■■□□□ 1.23
RC3H2Q9HBD1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.76■■□□□ 1.23
RC3H2Q9HBD1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.76■■□□□ 1.23
RC3H2Q9HBD1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.76■■□□□ 1.23
RC3H2Q9HBD1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.76■■□□□ 1.23
RC3H2Q9HBD1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.76■■□□□ 1.23
RC3H2Q9HBD1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RC3H2Q9HBD1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.75■■□□□ 1.23
RC3H2Q9HBD1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
RC3H2Q9HBD1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
RC3H2Q9HBD1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RC3H2Q9HBD1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
RC3H2Q9HBD1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RC3H2Q9HBD1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
RC3H2Q9HBD1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.75■■□□□ 1.23
RC3H2Q9HBD1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
RC3H2Q9HBD1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.75■■□□□ 1.23
RC3H2Q9HBD1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RC3H2Q9HBD1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
RC3H2Q9HBD1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.75■■□□□ 1.23
RC3H2Q9HBD1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
RC3H2Q9HBD1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
RC3H2Q9HBD1 AC061975.6-201ENST00000579045 1553 ntBASIC22.75■■□□□ 1.23
RC3H2Q9HBD1 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.75■■□□□ 1.23
RC3H2Q9HBD1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RC3H2Q9HBD1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RC3H2Q9HBD1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.74■■□□□ 1.23
RC3H2Q9HBD1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.74■■□□□ 1.23
RC3H2Q9HBD1 AC006058.3-201ENST00000606217 1069 ntBASIC22.74■■□□□ 1.23
RC3H2Q9HBD1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
RC3H2Q9HBD1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
RC3H2Q9HBD1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
RC3H2Q9HBD1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.74■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms