Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 AC092068.2-201ENST00000590491 1708 ntBASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
POLR1BQ9H9Y6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.89■□□□□ 0.94
POLR1BQ9H9Y6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
POLR1BQ9H9Y6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
POLR1BQ9H9Y6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR1BQ9H9Y6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.89■□□□□ 0.93
POLR1BQ9H9Y6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
POLR1BQ9H9Y6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
POLR1BQ9H9Y6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR1BQ9H9Y6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
POLR1BQ9H9Y6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.89■□□□□ 0.93
POLR1BQ9H9Y6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
POLR1BQ9H9Y6 ESRRAP2-201ENST00000418437 1549 ntBASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 SMUG1P1-201ENST00000590640 811 ntBASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1BQ9H9Y6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1BQ9H9Y6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
POLR1BQ9H9Y6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1BQ9H9Y6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
POLR1BQ9H9Y6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1BQ9H9Y6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
POLR1BQ9H9Y6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1BQ9H9Y6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.87■□□□□ 0.93
POLR1BQ9H9Y6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1BQ9H9Y6 AC010141.3-201ENST00000456659 717 ntBASIC20.87■□□□□ 0.93
POLR1BQ9H9Y6 AC079140.4-201ENST00000507448 529 ntBASIC20.87■□□□□ 0.93
POLR1BQ9H9Y6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.87■□□□□ 0.93
POLR1BQ9H9Y6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.87■□□□□ 0.93
POLR1BQ9H9Y6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
POLR1BQ9H9Y6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
POLR1BQ9H9Y6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1BQ9H9Y6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.87■□□□□ 0.93
POLR1BQ9H9Y6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1BQ9H9Y6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1BQ9H9Y6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1BQ9H9Y6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
POLR1BQ9H9Y6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.86■□□□□ 0.93
POLR1BQ9H9Y6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
POLR1BQ9H9Y6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.86■□□□□ 0.93
POLR1BQ9H9Y6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR1BQ9H9Y6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR1BQ9H9Y6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
POLR1BQ9H9Y6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR1BQ9H9Y6 CD99P1-205ENST00000527459 561 ntBASIC20.86■□□□□ 0.93
POLR1BQ9H9Y6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.86■□□□□ 0.93
POLR1BQ9H9Y6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
POLR1BQ9H9Y6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
POLR1BQ9H9Y6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR1BQ9H9Y6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR1BQ9H9Y6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
POLR1BQ9H9Y6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
POLR1BQ9H9Y6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
POLR1BQ9H9Y6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
POLR1BQ9H9Y6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
POLR1BQ9H9Y6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
POLR1BQ9H9Y6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.85■□□□□ 0.93
POLR1BQ9H9Y6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.85■□□□□ 0.93
POLR1BQ9H9Y6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
POLR1BQ9H9Y6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.85■□□□□ 0.93
POLR1BQ9H9Y6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
POLR1BQ9H9Y6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.85■□□□□ 0.93
POLR1BQ9H9Y6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.85■□□□□ 0.93
POLR1BQ9H9Y6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
POLR1BQ9H9Y6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
POLR1BQ9H9Y6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
POLR1BQ9H9Y6 AC004687.1-201ENST00000579003 1625 ntBASIC20.85■□□□□ 0.93
POLR1BQ9H9Y6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.85■□□□□ 0.93
POLR1BQ9H9Y6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
POLR1BQ9H9Y6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
POLR1BQ9H9Y6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.84■□□□□ 0.93
POLR1BQ9H9Y6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
POLR1BQ9H9Y6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
POLR1BQ9H9Y6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
POLR1BQ9H9Y6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
POLR1BQ9H9Y6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms