Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEC61A2Q9H9S3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEC61A2Q9H9S3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SEC61A2Q9H9S3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEC61A2Q9H9S3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEC61A2Q9H9S3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.96■□□□□ 0.63
SEC61A2Q9H9S3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.96■□□□□ 0.63
SEC61A2Q9H9S3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SEC61A2Q9H9S3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEC61A2Q9H9S3 AL034346.1-201ENST00000568244 1277 ntBASIC18.96■□□□□ 0.63
SEC61A2Q9H9S3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.96■□□□□ 0.63
SEC61A2Q9H9S3 MIR6084-201ENST00000622012 110 ntBASIC18.96■□□□□ 0.63
SEC61A2Q9H9S3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEC61A2Q9H9S3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
SEC61A2Q9H9S3 AC026471.6-201ENST00000622954 1905 ntBASIC18.96■□□□□ 0.63
SEC61A2Q9H9S3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.96■□□□□ 0.63
SEC61A2Q9H9S3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEC61A2Q9H9S3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.96■□□□□ 0.63
SEC61A2Q9H9S3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SEC61A2Q9H9S3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SEC61A2Q9H9S3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SEC61A2Q9H9S3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SEC61A2Q9H9S3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.95■□□□□ 0.62
SEC61A2Q9H9S3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.95■□□□□ 0.62
SEC61A2Q9H9S3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.95■□□□□ 0.62
SEC61A2Q9H9S3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SEC61A2Q9H9S3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.95■□□□□ 0.62
SEC61A2Q9H9S3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.95■□□□□ 0.62
SEC61A2Q9H9S3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEC61A2Q9H9S3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEC61A2Q9H9S3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEC61A2Q9H9S3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SEC61A2Q9H9S3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEC61A2Q9H9S3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.95■□□□□ 0.62
SEC61A2Q9H9S3 AC007375.3-201ENST00000600936 2314 ntBASIC18.95■□□□□ 0.62
SEC61A2Q9H9S3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SEC61A2Q9H9S3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEC61A2Q9H9S3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
SEC61A2Q9H9S3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SEC61A2Q9H9S3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.94■□□□□ 0.62
SEC61A2Q9H9S3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEC61A2Q9H9S3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEC61A2Q9H9S3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEC61A2Q9H9S3 MIR572-201ENST00000384983 95 ntBASIC18.94■□□□□ 0.62
SEC61A2Q9H9S3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SEC61A2Q9H9S3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.94■□□□□ 0.62
SEC61A2Q9H9S3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEC61A2Q9H9S3 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.94■□□□□ 0.62
SEC61A2Q9H9S3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SEC61A2Q9H9S3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.94■□□□□ 0.62
SEC61A2Q9H9S3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEC61A2Q9H9S3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.94■□□□□ 0.62
SEC61A2Q9H9S3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
SEC61A2Q9H9S3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEC61A2Q9H9S3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SEC61A2Q9H9S3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SEC61A2Q9H9S3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEC61A2Q9H9S3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEC61A2Q9H9S3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SEC61A2Q9H9S3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.93■□□□□ 0.62
SEC61A2Q9H9S3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.93■□□□□ 0.62
SEC61A2Q9H9S3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEC61A2Q9H9S3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEC61A2Q9H9S3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEC61A2Q9H9S3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEC61A2Q9H9S3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SEC61A2Q9H9S3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SEC61A2Q9H9S3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SEC61A2Q9H9S3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.93■□□□□ 0.62
SEC61A2Q9H9S3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEC61A2Q9H9S3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.92■□□□□ 0.62
SEC61A2Q9H9S3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SEC61A2Q9H9S3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.92■□□□□ 0.62
SEC61A2Q9H9S3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SEC61A2Q9H9S3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEC61A2Q9H9S3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEC61A2Q9H9S3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEC61A2Q9H9S3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SEC61A2Q9H9S3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.92■□□□□ 0.62
SEC61A2Q9H9S3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SEC61A2Q9H9S3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEC61A2Q9H9S3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEC61A2Q9H9S3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SEC61A2Q9H9S3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SEC61A2Q9H9S3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SEC61A2Q9H9S3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SEC61A2Q9H9S3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SEC61A2Q9H9S3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SEC61A2Q9H9S3 AC012414.1-201ENST00000556676 535 ntBASIC18.91■□□□□ 0.62
SEC61A2Q9H9S3 RARRES2P6-201ENST00000567333 442 ntBASIC18.91■□□□□ 0.62
SEC61A2Q9H9S3 SMUG1P1-201ENST00000590640 811 ntBASIC18.91■□□□□ 0.62
SEC61A2Q9H9S3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SEC61A2Q9H9S3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SEC61A2Q9H9S3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.91■□□□□ 0.62
SEC61A2Q9H9S3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SEC61A2Q9H9S3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SEC61A2Q9H9S3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEC61A2Q9H9S3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEC61A2Q9H9S3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEC61A2Q9H9S3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms