Protein–RNA interactions for Protein: Q9H0K1

SIK2, Serine/threonine-protein kinase SIK2, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIK2Q9H0K1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SIK2Q9H0K1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SIK2Q9H0K1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SIK2Q9H0K1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SIK2Q9H0K1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SIK2Q9H0K1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.02■■□□□ 1.12
SIK2Q9H0K1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
SIK2Q9H0K1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.02■■□□□ 1.12
SIK2Q9H0K1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
SIK2Q9H0K1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SIK2Q9H0K1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.02■■□□□ 1.12
SIK2Q9H0K1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.02■■□□□ 1.12
SIK2Q9H0K1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
SIK2Q9H0K1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.02■■□□□ 1.11
SIK2Q9H0K1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
SIK2Q9H0K1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.02■■□□□ 1.11
SIK2Q9H0K1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SIK2Q9H0K1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.01■■□□□ 1.11
SIK2Q9H0K1 AC004854.2-201ENST00000608450 1441 ntBASIC22.01■■□□□ 1.11
SIK2Q9H0K1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.01■■□□□ 1.11
SIK2Q9H0K1 KRT18P5-201ENST00000436075 1291 ntBASIC22.01■■□□□ 1.11
SIK2Q9H0K1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SIK2Q9H0K1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SIK2Q9H0K1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.01■■□□□ 1.11
SIK2Q9H0K1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
SIK2Q9H0K1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.01■■□□□ 1.11
SIK2Q9H0K1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SIK2Q9H0K1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
SIK2Q9H0K1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
SIK2Q9H0K1 AP004607.4-201ENST00000530158 1459 ntBASIC22.01■■□□□ 1.11
SIK2Q9H0K1 KRT87P-202ENST00000534226 1464 ntBASIC22.01■■□□□ 1.11
SIK2Q9H0K1 FBXW4P1-201ENST00000426721 2239 ntBASIC22■■□□□ 1.11
SIK2Q9H0K1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22■■□□□ 1.11
SIK2Q9H0K1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22■■□□□ 1.11
SIK2Q9H0K1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22■■□□□ 1.11
SIK2Q9H0K1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
SIK2Q9H0K1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SIK2Q9H0K1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22■■□□□ 1.11
SIK2Q9H0K1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22■■□□□ 1.11
SIK2Q9H0K1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
SIK2Q9H0K1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SIK2Q9H0K1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22■■□□□ 1.11
SIK2Q9H0K1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22■■□□□ 1.11
SIK2Q9H0K1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SIK2Q9H0K1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22■■□□□ 1.11
SIK2Q9H0K1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22■■□□□ 1.11
SIK2Q9H0K1 TESC-206ENST00000541210 936 ntTSL 3 BASIC22■■□□□ 1.11
SIK2Q9H0K1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22■■□□□ 1.11
SIK2Q9H0K1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SIK2Q9H0K1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SIK2Q9H0K1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SIK2Q9H0K1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
SIK2Q9H0K1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SIK2Q9H0K1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SIK2Q9H0K1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SIK2Q9H0K1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SIK2Q9H0K1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SIK2Q9H0K1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.99■■□□□ 1.11
SIK2Q9H0K1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SIK2Q9H0K1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.99■■□□□ 1.11
SIK2Q9H0K1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.99■■□□□ 1.11
SIK2Q9H0K1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.99■■□□□ 1.11
SIK2Q9H0K1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.99■■□□□ 1.11
SIK2Q9H0K1 AC079834.2-201ENST00000609776 1949 ntBASIC21.99■■□□□ 1.11
SIK2Q9H0K1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SIK2Q9H0K1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SIK2Q9H0K1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SIK2Q9H0K1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SIK2Q9H0K1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.98■■□□□ 1.11
SIK2Q9H0K1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.98■■□□□ 1.11
SIK2Q9H0K1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.98■■□□□ 1.11
SIK2Q9H0K1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.98■■□□□ 1.11
SIK2Q9H0K1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SIK2Q9H0K1 KRT18P61-201ENST00000585825 1298 ntBASIC21.98■■□□□ 1.11
SIK2Q9H0K1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SIK2Q9H0K1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SIK2Q9H0K1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SIK2Q9H0K1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SIK2Q9H0K1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SIK2Q9H0K1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SIK2Q9H0K1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.98■■□□□ 1.11
SIK2Q9H0K1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SIK2Q9H0K1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SIK2Q9H0K1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SIK2Q9H0K1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SIK2Q9H0K1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SIK2Q9H0K1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.97■■□□□ 1.11
SIK2Q9H0K1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SIK2Q9H0K1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
SIK2Q9H0K1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SIK2Q9H0K1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SIK2Q9H0K1 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.97■■□□□ 1.11
SIK2Q9H0K1 AC104187.1-201ENST00000607510 612 ntBASIC21.97■■□□□ 1.11
SIK2Q9H0K1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SIK2Q9H0K1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.97■■□□□ 1.11
SIK2Q9H0K1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SIK2Q9H0K1 LINC00565-201ENST00000562710 2331 ntBASIC21.97■■□□□ 1.11
SIK2Q9H0K1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.97■■□□□ 1.11
SIK2Q9H0K1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SIK2Q9H0K1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms