Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSBP3Q9BWW4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.66■□□□□ 0.42
SSBP3Q9BWW4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSBP3Q9BWW4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSBP3Q9BWW4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.66■□□□□ 0.42
SSBP3Q9BWW4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSBP3Q9BWW4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSBP3Q9BWW4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSBP3Q9BWW4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSBP3Q9BWW4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.66■□□□□ 0.42
SSBP3Q9BWW4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SSBP3Q9BWW4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.66■□□□□ 0.42
SSBP3Q9BWW4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSBP3Q9BWW4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.66■□□□□ 0.42
SSBP3Q9BWW4 BID-214ENST00000617586 542 ntTSL 5 BASIC17.66■□□□□ 0.42
SSBP3Q9BWW4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.66■□□□□ 0.42
SSBP3Q9BWW4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SSBP3Q9BWW4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SSBP3Q9BWW4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSBP3Q9BWW4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSBP3Q9BWW4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SSBP3Q9BWW4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSBP3Q9BWW4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSBP3Q9BWW4 AC092053.2-201ENST00000640557 1818 ntBASIC17.65■□□□□ 0.42
SSBP3Q9BWW4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SSBP3Q9BWW4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSBP3Q9BWW4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
SSBP3Q9BWW4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SSBP3Q9BWW4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSBP3Q9BWW4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SSBP3Q9BWW4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.65■□□□□ 0.42
SSBP3Q9BWW4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SSBP3Q9BWW4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.65■□□□□ 0.42
SSBP3Q9BWW4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.65■□□□□ 0.42
SSBP3Q9BWW4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.65■□□□□ 0.42
SSBP3Q9BWW4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SSBP3Q9BWW4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSBP3Q9BWW4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.64■□□□□ 0.42
SSBP3Q9BWW4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.64■□□□□ 0.42
SSBP3Q9BWW4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 AC090192.1-201ENST00000517740 490 ntBASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 AP001160.3-201ENST00000601484 763 ntBASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSBP3Q9BWW4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSBP3Q9BWW4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSBP3Q9BWW4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.63■□□□□ 0.41
SSBP3Q9BWW4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSBP3Q9BWW4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SSBP3Q9BWW4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSBP3Q9BWW4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.63■□□□□ 0.41
SSBP3Q9BWW4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSBP3Q9BWW4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SSBP3Q9BWW4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.63■□□□□ 0.41
SSBP3Q9BWW4 AC138907.5-202ENST00000569484 235 ntBASIC17.63■□□□□ 0.41
SSBP3Q9BWW4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSBP3Q9BWW4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSBP3Q9BWW4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.63■□□□□ 0.41
SSBP3Q9BWW4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSBP3Q9BWW4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
SSBP3Q9BWW4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SSBP3Q9BWW4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.62■□□□□ 0.41
SSBP3Q9BWW4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.62■□□□□ 0.41
SSBP3Q9BWW4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SSBP3Q9BWW4 AC010141.2-201ENST00000452426 721 ntBASIC17.62■□□□□ 0.41
SSBP3Q9BWW4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.62■□□□□ 0.41
SSBP3Q9BWW4 AC053503.5-201ENST00000601508 636 ntBASIC17.62■□□□□ 0.41
SSBP3Q9BWW4 AC080038.1-201ENST00000611274 1154 ntBASIC17.62■□□□□ 0.41
SSBP3Q9BWW4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.62■□□□□ 0.41
SSBP3Q9BWW4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSBP3Q9BWW4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSBP3Q9BWW4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSBP3Q9BWW4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
SSBP3Q9BWW4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
SSBP3Q9BWW4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
SSBP3Q9BWW4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SSBP3Q9BWW4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSBP3Q9BWW4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SSBP3Q9BWW4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSBP3Q9BWW4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SSBP3Q9BWW4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms