Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 MIR6724-2-201ENST00000616483 92 ntBASIC19.38■□□□□ 0.69
COPS4Q9BT78 MIR6724-4-201ENST00000617390 92 ntBASIC19.38■□□□□ 0.69
COPS4Q9BT78 MIR6724-3-201ENST00000622482 92 ntBASIC19.38■□□□□ 0.69
COPS4Q9BT78 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPS4Q9BT78 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPS4Q9BT78 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
COPS4Q9BT78 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.37■□□□□ 0.69
COPS4Q9BT78 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
COPS4Q9BT78 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COPS4Q9BT78 OXCT2P1-201ENST00000447263 1535 ntBASIC19.37■□□□□ 0.69
COPS4Q9BT78 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
COPS4Q9BT78 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COPS4Q9BT78 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPS4Q9BT78 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPS4Q9BT78 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPS4Q9BT78 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COPS4Q9BT78 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
COPS4Q9BT78 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.37■□□□□ 0.69
COPS4Q9BT78 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.37■□□□□ 0.69
COPS4Q9BT78 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.37■□□□□ 0.69
COPS4Q9BT78 AL035685.1-201ENST00000636663 812 ntBASIC19.37■□□□□ 0.69
COPS4Q9BT78 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPS4Q9BT78 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPS4Q9BT78 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPS4Q9BT78 AC026471.6-201ENST00000622954 1905 ntBASIC19.37■□□□□ 0.69
COPS4Q9BT78 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPS4Q9BT78 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
COPS4Q9BT78 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPS4Q9BT78 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
COPS4Q9BT78 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COPS4Q9BT78 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.36■□□□□ 0.69
COPS4Q9BT78 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COPS4Q9BT78 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.36■□□□□ 0.69
COPS4Q9BT78 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
COPS4Q9BT78 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
COPS4Q9BT78 KRT16P3-201ENST00000439127 1283 ntBASIC19.36■□□□□ 0.69
COPS4Q9BT78 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
COPS4Q9BT78 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.36■□□□□ 0.69
COPS4Q9BT78 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
COPS4Q9BT78 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COPS4Q9BT78 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COPS4Q9BT78 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COPS4Q9BT78 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COPS4Q9BT78 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COPS4Q9BT78 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COPS4Q9BT78 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COPS4Q9BT78 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COPS4Q9BT78 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
COPS4Q9BT78 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPS4Q9BT78 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COPS4Q9BT78 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.35■□□□□ 0.69
COPS4Q9BT78 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPS4Q9BT78 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPS4Q9BT78 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
COPS4Q9BT78 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.35■□□□□ 0.69
COPS4Q9BT78 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.35■□□□□ 0.69
COPS4Q9BT78 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COPS4Q9BT78 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.35■□□□□ 0.69
COPS4Q9BT78 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
COPS4Q9BT78 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
COPS4Q9BT78 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
COPS4Q9BT78 C17orf82-201ENST00000623772 1530 ntBASIC19.35■□□□□ 0.69
COPS4Q9BT78 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPS4Q9BT78 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPS4Q9BT78 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPS4Q9BT78 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPS4Q9BT78 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPS4Q9BT78 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPS4Q9BT78 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPS4Q9BT78 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPS4Q9BT78 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COPS4Q9BT78 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPS4Q9BT78 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.34■□□□□ 0.69
COPS4Q9BT78 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
COPS4Q9BT78 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.34■□□□□ 0.69
COPS4Q9BT78 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.34■□□□□ 0.69
COPS4Q9BT78 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPS4Q9BT78 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
COPS4Q9BT78 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
COPS4Q9BT78 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.34■□□□□ 0.69
COPS4Q9BT78 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COPS4Q9BT78 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPS4Q9BT78 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPS4Q9BT78 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
COPS4Q9BT78 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COPS4Q9BT78 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.33■□□□□ 0.69
COPS4Q9BT78 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COPS4Q9BT78 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.33■□□□□ 0.69
COPS4Q9BT78 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
COPS4Q9BT78 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.33■□□□□ 0.68
COPS4Q9BT78 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
COPS4Q9BT78 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
COPS4Q9BT78 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COPS4Q9BT78 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.33■□□□□ 0.68
COPS4Q9BT78 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
COPS4Q9BT78 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
COPS4Q9BT78 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.33■□□□□ 0.68
COPS4Q9BT78 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
COPS4Q9BT78 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPS4Q9BT78 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms