Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPPED1Q9BRF8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPPED1Q9BRF8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPPED1Q9BRF8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPPED1Q9BRF8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPPED1Q9BRF8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPPED1Q9BRF8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPPED1Q9BRF8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPPED1Q9BRF8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPPED1Q9BRF8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.93■□□□□ 0.78
CPPED1Q9BRF8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPPED1Q9BRF8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPPED1Q9BRF8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPPED1Q9BRF8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CPPED1Q9BRF8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPPED1Q9BRF8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPPED1Q9BRF8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPPED1Q9BRF8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPPED1Q9BRF8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPPED1Q9BRF8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPPED1Q9BRF8 LINC01006-201ENST00000333319 2292 ntBASIC19.92■□□□□ 0.78
CPPED1Q9BRF8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPPED1Q9BRF8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPPED1Q9BRF8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPPED1Q9BRF8 SYT6-210ENST00000641643 1587 ntBASIC19.92■□□□□ 0.78
CPPED1Q9BRF8 FEM1AP1-201ENST00000431297 1995 ntBASIC19.92■□□□□ 0.78
CPPED1Q9BRF8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPPED1Q9BRF8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPPED1Q9BRF8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPPED1Q9BRF8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPPED1Q9BRF8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.92■□□□□ 0.78
CPPED1Q9BRF8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CPPED1Q9BRF8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPPED1Q9BRF8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPPED1Q9BRF8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPPED1Q9BRF8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CPPED1Q9BRF8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.92■□□□□ 0.78
CPPED1Q9BRF8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.92■□□□□ 0.78
CPPED1Q9BRF8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.92■□□□□ 0.78
CPPED1Q9BRF8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPPED1Q9BRF8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPPED1Q9BRF8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPPED1Q9BRF8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPPED1Q9BRF8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPPED1Q9BRF8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.91■□□□□ 0.78
CPPED1Q9BRF8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.91■□□□□ 0.78
CPPED1Q9BRF8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPPED1Q9BRF8 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.91■□□□□ 0.78
CPPED1Q9BRF8 MIR4466-201ENST00000606121 54 ntBASIC19.91■□□□□ 0.78
CPPED1Q9BRF8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPPED1Q9BRF8 AC011298.3-201ENST00000615796 283 ntBASIC19.91■□□□□ 0.78
CPPED1Q9BRF8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPPED1Q9BRF8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.91■□□□□ 0.78
CPPED1Q9BRF8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPPED1Q9BRF8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPPED1Q9BRF8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPPED1Q9BRF8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPPED1Q9BRF8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.9■□□□□ 0.78
CPPED1Q9BRF8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPPED1Q9BRF8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CPPED1Q9BRF8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPPED1Q9BRF8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.9■□□□□ 0.78
CPPED1Q9BRF8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPPED1Q9BRF8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPPED1Q9BRF8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPPED1Q9BRF8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CPPED1Q9BRF8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPPED1Q9BRF8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.9■□□□□ 0.78
CPPED1Q9BRF8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CPPED1Q9BRF8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.9■□□□□ 0.78
CPPED1Q9BRF8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.9■□□□□ 0.78
CPPED1Q9BRF8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPPED1Q9BRF8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.9■□□□□ 0.78
CPPED1Q9BRF8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CPPED1Q9BRF8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CPPED1Q9BRF8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CPPED1Q9BRF8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPPED1Q9BRF8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPPED1Q9BRF8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPPED1Q9BRF8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPPED1Q9BRF8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CPPED1Q9BRF8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPPED1Q9BRF8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPPED1Q9BRF8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CPPED1Q9BRF8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPPED1Q9BRF8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CPPED1Q9BRF8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.89■□□□□ 0.77
CPPED1Q9BRF8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CPPED1Q9BRF8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPPED1Q9BRF8 DUX4L19-201ENST00000557448 1267 ntBASIC19.89■□□□□ 0.77
CPPED1Q9BRF8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CPPED1Q9BRF8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
CPPED1Q9BRF8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
CPPED1Q9BRF8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPPED1Q9BRF8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CPPED1Q9BRF8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPPED1Q9BRF8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CPPED1Q9BRF8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CPPED1Q9BRF8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CPPED1Q9BRF8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms