Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NPAS2Q99743 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPAS2Q99743 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NPAS2Q99743 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.68■□□□□ 0.9
NPAS2Q99743 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPAS2Q99743 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPAS2Q99743 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPAS2Q99743 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NPAS2Q99743 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPAS2Q99743 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NPAS2Q99743 AC027682.1-201ENST00000562846 899 ntBASIC20.68■□□□□ 0.9
NPAS2Q99743 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPAS2Q99743 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPAS2Q99743 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPAS2Q99743 RASA4CP-201ENST00000424092 1398 ntBASIC20.68■□□□□ 0.9
NPAS2Q99743 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPAS2Q99743 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.68■□□□□ 0.9
NPAS2Q99743 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NPAS2Q99743 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NPAS2Q99743 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPAS2Q99743 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.67■□□□□ 0.9
NPAS2Q99743 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NPAS2Q99743 AC099791.1-201ENST00000416440 715 ntBASIC20.67■□□□□ 0.9
NPAS2Q99743 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPAS2Q99743 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.67■□□□□ 0.9
NPAS2Q99743 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NPAS2Q99743 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NPAS2Q99743 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.67■□□□□ 0.9
NPAS2Q99743 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NPAS2Q99743 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
NPAS2Q99743 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPAS2Q99743 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NPAS2Q99743 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPAS2Q99743 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
NPAS2Q99743 AC026471.6-201ENST00000622954 1905 ntBASIC20.66■□□□□ 0.9
NPAS2Q99743 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPAS2Q99743 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPAS2Q99743 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPAS2Q99743 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.66■□□□□ 0.9
NPAS2Q99743 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.66■□□□□ 0.9
NPAS2Q99743 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NPAS2Q99743 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.66■□□□□ 0.9
NPAS2Q99743 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.66■□□□□ 0.9
NPAS2Q99743 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NPAS2Q99743 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPAS2Q99743 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPAS2Q99743 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NPAS2Q99743 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPAS2Q99743 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPAS2Q99743 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NPAS2Q99743 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPAS2Q99743 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS2Q99743 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS2Q99743 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS2Q99743 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.65■□□□□ 0.9
NPAS2Q99743 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS2Q99743 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
NPAS2Q99743 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.65■□□□□ 0.9
NPAS2Q99743 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS2Q99743 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS2Q99743 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS2Q99743 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NPAS2Q99743 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.65■□□□□ 0.9
NPAS2Q99743 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NPAS2Q99743 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NPAS2Q99743 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NPAS2Q99743 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
NPAS2Q99743 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS2Q99743 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.64■□□□□ 0.89
NPAS2Q99743 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS2Q99743 BX842568.3-201ENST00000418104 571 ntBASIC20.64■□□□□ 0.89
NPAS2Q99743 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.64■□□□□ 0.89
NPAS2Q99743 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
NPAS2Q99743 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.64■□□□□ 0.89
NPAS2Q99743 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.64■□□□□ 0.89
NPAS2Q99743 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
NPAS2Q99743 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS2Q99743 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS2Q99743 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS2Q99743 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS2Q99743 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.63■□□□□ 0.89
NPAS2Q99743 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS2Q99743 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS2Q99743 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.63■□□□□ 0.89
NPAS2Q99743 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.63■□□□□ 0.89
NPAS2Q99743 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.63■□□□□ 0.89
NPAS2Q99743 AC233992.3-201ENST00000607491 485 ntBASIC20.63■□□□□ 0.89
NPAS2Q99743 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.63■□□□□ 0.89
NPAS2Q99743 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS2Q99743 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS2Q99743 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS2Q99743 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS2Q99743 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS2Q99743 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPAS2Q99743 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPAS2Q99743 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NPAS2Q99743 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.62■□□□□ 0.89
NPAS2Q99743 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.62■□□□□ 0.89
NPAS2Q99743 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPAS2Q99743 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 596.8 ms