Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS1Q99742 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
NPAS1Q99742 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS1Q99742 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS1Q99742 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS1Q99742 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.32■□□□□ 0.68
NPAS1Q99742 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS1Q99742 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
NPAS1Q99742 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS1Q99742 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS1Q99742 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.32■□□□□ 0.68
NPAS1Q99742 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.32■□□□□ 0.68
NPAS1Q99742 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS1Q99742 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS1Q99742 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.32■□□□□ 0.68
NPAS1Q99742 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.32■□□□□ 0.68
NPAS1Q99742 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.32■□□□□ 0.68
NPAS1Q99742 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.32■□□□□ 0.68
NPAS1Q99742 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS1Q99742 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS1Q99742 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.32■□□□□ 0.68
NPAS1Q99742 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS1Q99742 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.32■□□□□ 0.68
NPAS1Q99742 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS1Q99742 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.32■□□□□ 0.68
NPAS1Q99742 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS1Q99742 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS1Q99742 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NPAS1Q99742 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS1Q99742 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS1Q99742 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS1Q99742 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS1Q99742 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS1Q99742 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS1Q99742 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.31■□□□□ 0.68
NPAS1Q99742 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
NPAS1Q99742 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.31■□□□□ 0.68
NPAS1Q99742 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.31■□□□□ 0.68
NPAS1Q99742 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS1Q99742 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.31■□□□□ 0.68
NPAS1Q99742 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS1Q99742 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS1Q99742 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NPAS1Q99742 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS1Q99742 RNF165-205ENST00000588679 2904 ntBASIC19.31■□□□□ 0.68
NPAS1Q99742 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.31■□□□□ 0.68
NPAS1Q99742 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS1Q99742 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS1Q99742 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS1Q99742 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS1Q99742 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NPAS1Q99742 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.3■□□□□ 0.68
NPAS1Q99742 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.3■□□□□ 0.68
NPAS1Q99742 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.3■□□□□ 0.68
NPAS1Q99742 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.3■□□□□ 0.68
NPAS1Q99742 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.3■□□□□ 0.68
NPAS1Q99742 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NPAS1Q99742 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.3■□□□□ 0.68
NPAS1Q99742 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.3■□□□□ 0.68
NPAS1Q99742 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
NPAS1Q99742 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS1Q99742 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.3■□□□□ 0.68
NPAS1Q99742 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS1Q99742 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS1Q99742 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS1Q99742 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS1Q99742 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS1Q99742 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS1Q99742 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS1Q99742 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NPAS1Q99742 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.29■□□□□ 0.68
NPAS1Q99742 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS1Q99742 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS1Q99742 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS1Q99742 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.29■□□□□ 0.68
NPAS1Q99742 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NPAS1Q99742 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.29■□□□□ 0.68
NPAS1Q99742 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.29■□□□□ 0.68
NPAS1Q99742 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS1Q99742 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS1Q99742 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS1Q99742 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS1Q99742 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.28■□□□□ 0.68
NPAS1Q99742 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS1Q99742 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS1Q99742 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
NPAS1Q99742 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.28■□□□□ 0.68
NPAS1Q99742 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS1Q99742 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.28■□□□□ 0.68
NPAS1Q99742 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NPAS1Q99742 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.28■□□□□ 0.68
NPAS1Q99742 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.28■□□□□ 0.68
NPAS1Q99742 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NPAS1Q99742 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS1Q99742 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS1Q99742 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.28■□□□□ 0.68
NPAS1Q99742 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS1Q99742 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
NPAS1Q99742 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.27■□□□□ 0.68
NPAS1Q99742 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms