Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDCA3Q99618 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDCA3Q99618 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.31■■□□□ 1.16
CDCA3Q99618 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDCA3Q99618 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDCA3Q99618 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
CDCA3Q99618 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDCA3Q99618 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDCA3Q99618 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.31■■□□□ 1.16
CDCA3Q99618 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDCA3Q99618 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDCA3Q99618 LSM12P1-201ENST00000411836 588 ntBASIC22.31■■□□□ 1.16
CDCA3Q99618 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.31■■□□□ 1.16
CDCA3Q99618 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.31■■□□□ 1.16
CDCA3Q99618 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDCA3Q99618 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.31■■□□□ 1.16
CDCA3Q99618 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.31■■□□□ 1.16
CDCA3Q99618 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC22.31■■□□□ 1.16
CDCA3Q99618 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC22.31■■□□□ 1.16
CDCA3Q99618 AC073648.6-201ENST00000641589 218 ntBASIC22.31■■□□□ 1.16
CDCA3Q99618 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDCA3Q99618 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDCA3Q99618 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.31■■□□□ 1.16
CDCA3Q99618 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDCA3Q99618 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.31■■□□□ 1.16
CDCA3Q99618 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDCA3Q99618 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDCA3Q99618 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDCA3Q99618 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
CDCA3Q99618 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.3■■□□□ 1.16
CDCA3Q99618 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.3■■□□□ 1.16
CDCA3Q99618 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.3■■□□□ 1.16
CDCA3Q99618 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC22.3■■□□□ 1.16
CDCA3Q99618 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC22.3■■□□□ 1.16
CDCA3Q99618 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
CDCA3Q99618 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.3■■□□□ 1.16
CDCA3Q99618 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDCA3Q99618 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.3■■□□□ 1.16
CDCA3Q99618 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.3■■□□□ 1.16
CDCA3Q99618 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDCA3Q99618 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDCA3Q99618 UBE2SP1-201ENST00000450587 669 ntBASIC22.29■■□□□ 1.16
CDCA3Q99618 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.29■■□□□ 1.16
CDCA3Q99618 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC22.29■■□□□ 1.16
CDCA3Q99618 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.29■■□□□ 1.16
CDCA3Q99618 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDCA3Q99618 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDCA3Q99618 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.28■■□□□ 1.16
CDCA3Q99618 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.28■■□□□ 1.16
CDCA3Q99618 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDCA3Q99618 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
CDCA3Q99618 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.28■■□□□ 1.16
CDCA3Q99618 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.28■■□□□ 1.16
CDCA3Q99618 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CDCA3Q99618 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.28■■□□□ 1.16
CDCA3Q99618 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.28■■□□□ 1.16
CDCA3Q99618 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CDCA3Q99618 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDCA3Q99618 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.27■■□□□ 1.16
CDCA3Q99618 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
CDCA3Q99618 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.27■■□□□ 1.16
CDCA3Q99618 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDCA3Q99618 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC22.27■■□□□ 1.16
CDCA3Q99618 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDCA3Q99618 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
CDCA3Q99618 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
CDCA3Q99618 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDCA3Q99618 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CDCA3Q99618 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.26■■□□□ 1.15
CDCA3Q99618 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDCA3Q99618 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDCA3Q99618 AC008550.1-201ENST00000511500 884 ntBASIC22.26■■□□□ 1.15
CDCA3Q99618 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.26■■□□□ 1.15
CDCA3Q99618 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDCA3Q99618 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
CDCA3Q99618 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.25■■□□□ 1.15
CDCA3Q99618 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.25■■□□□ 1.15
CDCA3Q99618 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.25■■□□□ 1.15
CDCA3Q99618 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CDCA3Q99618 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.25■■□□□ 1.15
CDCA3Q99618 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.25■■□□□ 1.15
CDCA3Q99618 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDCA3Q99618 GATS-209ENST00000454084 1030 ntTSL 3 BASIC22.25■■□□□ 1.15
CDCA3Q99618 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.25■■□□□ 1.15
CDCA3Q99618 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.25■■□□□ 1.15
CDCA3Q99618 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.25■■□□□ 1.15
CDCA3Q99618 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.25■■□□□ 1.15
CDCA3Q99618 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
CDCA3Q99618 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.25■■□□□ 1.15
CDCA3Q99618 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
CDCA3Q99618 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.25■■□□□ 1.15
CDCA3Q99618 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDCA3Q99618 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDCA3Q99618 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDCA3Q99618 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDCA3Q99618 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.24■■□□□ 1.15
CDCA3Q99618 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
CDCA3Q99618 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
CDCA3Q99618 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC22.24■■□□□ 1.15
CDCA3Q99618 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms