Protein–RNA interactions for Protein: Q99439

CNN2, Calponin-2, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2Q99439 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNN2Q99439 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNN2Q99439 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNN2Q99439 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNN2Q99439 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.89■□□□□ 0.62
CNN2Q99439 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNN2Q99439 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.89■□□□□ 0.61
CNN2Q99439 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNN2Q99439 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNN2Q99439 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNN2Q99439 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CNN2Q99439 AL157384.1-201ENST00000445995 2473 ntBASIC18.89■□□□□ 0.61
CNN2Q99439 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNN2Q99439 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CNN2Q99439 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.89■□□□□ 0.61
CNN2Q99439 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.89■□□□□ 0.61
CNN2Q99439 AL035685.1-201ENST00000636663 812 ntBASIC18.89■□□□□ 0.61
CNN2Q99439 LINC01521-201ENST00000504184 1943 ntBASIC18.89■□□□□ 0.61
CNN2Q99439 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.89■□□□□ 0.61
CNN2Q99439 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CNN2Q99439 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNN2Q99439 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CNN2Q99439 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNN2Q99439 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNN2Q99439 AC003102.1-202ENST00000563394 1796 ntBASIC18.88■□□□□ 0.61
CNN2Q99439 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNN2Q99439 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CNN2Q99439 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNN2Q99439 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.88■□□□□ 0.61
CNN2Q99439 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNN2Q99439 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CNN2Q99439 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNN2Q99439 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNN2Q99439 AL049796.1-201ENST00000565336 1766 ntBASIC18.88■□□□□ 0.61
CNN2Q99439 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNN2Q99439 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNN2Q99439 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.88■□□□□ 0.61
CNN2Q99439 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNN2Q99439 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNN2Q99439 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNN2Q99439 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNN2Q99439 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNN2Q99439 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNN2Q99439 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNN2Q99439 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNN2Q99439 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNN2Q99439 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNN2Q99439 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.87■□□□□ 0.61
CNN2Q99439 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.87■□□□□ 0.61
CNN2Q99439 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNN2Q99439 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNN2Q99439 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.87■□□□□ 0.61
CNN2Q99439 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNN2Q99439 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNN2Q99439 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
CNN2Q99439 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
CNN2Q99439 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CNN2Q99439 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CNN2Q99439 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNN2Q99439 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.86■□□□□ 0.61
CNN2Q99439 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNN2Q99439 GUSBP5-201ENST00000418136 578 ntBASIC18.86■□□□□ 0.61
CNN2Q99439 AL138724.1-201ENST00000606771 1088 ntBASIC18.86■□□□□ 0.61
CNN2Q99439 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.86■□□□□ 0.61
CNN2Q99439 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNN2Q99439 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNN2Q99439 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNN2Q99439 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNN2Q99439 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNN2Q99439 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNN2Q99439 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNN2Q99439 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNN2Q99439 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNN2Q99439 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNN2Q99439 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.85■□□□□ 0.61
CNN2Q99439 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.85■□□□□ 0.61
CNN2Q99439 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.85■□□□□ 0.61
CNN2Q99439 AL512631.2-201ENST00000604634 923 ntBASIC18.85■□□□□ 0.61
CNN2Q99439 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.85■□□□□ 0.61
CNN2Q99439 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
CNN2Q99439 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNN2Q99439 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNN2Q99439 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNN2Q99439 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNN2Q99439 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNN2Q99439 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNN2Q99439 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNN2Q99439 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.84■□□□□ 0.61
CNN2Q99439 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.84■□□□□ 0.61
CNN2Q99439 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.84■□□□□ 0.61
CNN2Q99439 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNN2Q99439 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.84■□□□□ 0.61
CNN2Q99439 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNN2Q99439 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.84■□□□□ 0.61
CNN2Q99439 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.84■□□□□ 0.61
CNN2Q99439 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNN2Q99439 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNN2Q99439 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CNN2Q99439 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CNN2Q99439 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms