Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCC1Q96S66 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CLCC1Q96S66 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCC1Q96S66 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CLCC1Q96S66 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCC1Q96S66 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.74■□□□□ 0.43
CLCC1Q96S66 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.74■□□□□ 0.43
CLCC1Q96S66 FP325331.1-202ENST00000623531 1380 ntBASIC17.74■□□□□ 0.43
CLCC1Q96S66 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCC1Q96S66 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCC1Q96S66 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.73■□□□□ 0.43
CLCC1Q96S66 AC139530.1-201ENST00000575312 1977 ntBASIC17.73■□□□□ 0.43
CLCC1Q96S66 C17orf82-201ENST00000623772 1530 ntBASIC17.73■□□□□ 0.43
CLCC1Q96S66 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCC1Q96S66 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CLCC1Q96S66 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCC1Q96S66 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CLCC1Q96S66 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCC1Q96S66 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCC1Q96S66 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCC1Q96S66 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCC1Q96S66 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCC1Q96S66 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.72■□□□□ 0.43
CLCC1Q96S66 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CLCC1Q96S66 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.72■□□□□ 0.43
CLCC1Q96S66 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCC1Q96S66 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.72■□□□□ 0.43
CLCC1Q96S66 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.72■□□□□ 0.43
CLCC1Q96S66 MIR3621-201ENST00000580529 85 ntBASIC17.72■□□□□ 0.43
CLCC1Q96S66 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.72■□□□□ 0.43
CLCC1Q96S66 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCC1Q96S66 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCC1Q96S66 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCC1Q96S66 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCC1Q96S66 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CLCC1Q96S66 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCC1Q96S66 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCC1Q96S66 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCC1Q96S66 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCC1Q96S66 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCC1Q96S66 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.71■□□□□ 0.43
CLCC1Q96S66 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CLCC1Q96S66 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLCC1Q96S66 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCC1Q96S66 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.71■□□□□ 0.43
CLCC1Q96S66 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCC1Q96S66 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CLCC1Q96S66 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLCC1Q96S66 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCC1Q96S66 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLCC1Q96S66 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLCC1Q96S66 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.71■□□□□ 0.43
CLCC1Q96S66 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.71■□□□□ 0.43
CLCC1Q96S66 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.71■□□□□ 0.43
CLCC1Q96S66 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCC1Q96S66 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCC1Q96S66 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCC1Q96S66 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.71■□□□□ 0.43
CLCC1Q96S66 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLCC1Q96S66 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLCC1Q96S66 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLCC1Q96S66 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCC1Q96S66 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCC1Q96S66 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLCC1Q96S66 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.7■□□□□ 0.42
CLCC1Q96S66 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCC1Q96S66 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CLCC1Q96S66 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCC1Q96S66 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCC1Q96S66 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CLCC1Q96S66 DUX4L4-201ENST00000566884 1269 ntBASIC17.7■□□□□ 0.42
CLCC1Q96S66 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.7■□□□□ 0.42
CLCC1Q96S66 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CLCC1Q96S66 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLCC1Q96S66 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CLCC1Q96S66 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCC1Q96S66 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CLCC1Q96S66 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.7■□□□□ 0.42
CLCC1Q96S66 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCC1Q96S66 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CLCC1Q96S66 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCC1Q96S66 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCC1Q96S66 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CLCC1Q96S66 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.69■□□□□ 0.42
CLCC1Q96S66 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCC1Q96S66 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CLCC1Q96S66 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCC1Q96S66 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCC1Q96S66 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.69■□□□□ 0.42
CLCC1Q96S66 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.69■□□□□ 0.42
CLCC1Q96S66 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCC1Q96S66 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.69■□□□□ 0.42
CLCC1Q96S66 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCC1Q96S66 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCC1Q96S66 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCC1Q96S66 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCC1Q96S66 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CLCC1Q96S66 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCC1Q96S66 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCC1Q96S66 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms