Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMCN1Q96RW7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC6.62□□□□□ -1.35
HMCN1Q96RW7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HMCN1Q96RW7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 AL355472.2-201ENST00000422958 438 ntBASIC6.61□□□□□ -1.35
HMCN1Q96RW7 SAPCD2P4-201ENST00000424595 1171 ntBASIC6.61□□□□□ -1.35
HMCN1Q96RW7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 AC104076.2-201ENST00000448912 469 ntBASIC6.61□□□□□ -1.35
HMCN1Q96RW7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 AC010947.1-201ENST00000623454 693 ntBASIC6.61□□□□□ -1.35
HMCN1Q96RW7 AC009237.3-201ENST00000393279 1427 ntBASIC6.61□□□□□ -1.35
HMCN1Q96RW7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 HLA-J-202ENST00000469281 1241 ntBASIC6.61□□□□□ -1.35
HMCN1Q96RW7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
HMCN1Q96RW7 CYP2D8P-201ENST00000433633 1490 ntBASIC6.6□□□□□ -1.35
HMCN1Q96RW7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 AC097639.1-201ENST00000565519 1891 ntBASIC6.6□□□□□ -1.35
HMCN1Q96RW7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 COPE-203ENST00000351079 907 ntTSL 2 BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 MYC-208ENST00000641036 567 ntBASIC6.6□□□□□ -1.35
HMCN1Q96RW7 KRT8P10-201ENST00000450021 1447 ntBASIC6.6□□□□□ -1.35
HMCN1Q96RW7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 KRT17P3-201ENST00000420566 1262 ntBASIC6.6□□□□□ -1.35
HMCN1Q96RW7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 LINC01568-207ENST00000641790 1380 ntBASIC6.6□□□□□ -1.35
HMCN1Q96RW7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 HCG4P8-203ENST00000443049 980 ntBASIC6.6□□□□□ -1.35
HMCN1Q96RW7 AC133681.1-201ENST00000465482 601 ntBASIC6.6□□□□□ -1.35
HMCN1Q96RW7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 WWOX-216ENST00000569818 525 ntBASIC6.6□□□□□ -1.35
HMCN1Q96RW7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 AL023875.1-201ENST00000640777 796 ntBASIC6.6□□□□□ -1.35
HMCN1Q96RW7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC6.6□□□□□ -1.35
HMCN1Q96RW7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HMCN1Q96RW7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HMCN1Q96RW7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HMCN1Q96RW7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC6.59□□□□□ -1.35
HMCN1Q96RW7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC6.59□□□□□ -1.35
HMCN1Q96RW7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC6.59□□□□□ -1.35
HMCN1Q96RW7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HMCN1Q96RW7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
HMCN1Q96RW7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HMCN1Q96RW7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
HMCN1Q96RW7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC6.59□□□□□ -1.35
HMCN1Q96RW7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HMCN1Q96RW7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms