Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.45■□□□□ 0.22
DUX3Q96PT4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.45■□□□□ 0.22
DUX3Q96PT4 UBE2DNL-204ENST00000602536 740 ntBASIC16.45■□□□□ 0.22
DUX3Q96PT4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DUX3Q96PT4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
DUX3Q96PT4 AC133561.1-201ENST00000568600 2415 ntBASIC16.45■□□□□ 0.22
DUX3Q96PT4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DUX3Q96PT4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DUX3Q96PT4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.44■□□□□ 0.22
DUX3Q96PT4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DUX3Q96PT4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.44■□□□□ 0.22
DUX3Q96PT4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DUX3Q96PT4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DUX3Q96PT4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
DUX3Q96PT4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.44■□□□□ 0.22
DUX3Q96PT4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DUX3Q96PT4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DUX3Q96PT4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
DUX3Q96PT4 ID1-201ENST00000376105 1233 ntBASIC16.44■□□□□ 0.22
DUX3Q96PT4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DUX3Q96PT4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.44■□□□□ 0.22
DUX3Q96PT4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.44■□□□□ 0.22
DUX3Q96PT4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.44■□□□□ 0.22
DUX3Q96PT4 AP001160.3-201ENST00000601484 763 ntBASIC16.44■□□□□ 0.22
DUX3Q96PT4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
DUX3Q96PT4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DUX3Q96PT4 AP006587.3-201ENST00000525742 1516 ntBASIC16.44■□□□□ 0.22
DUX3Q96PT4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DUX3Q96PT4 AC080038.3-201ENST00000623346 1952 ntBASIC16.44■□□□□ 0.22
DUX3Q96PT4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DUX3Q96PT4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.43■□□□□ 0.22
DUX3Q96PT4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DUX3Q96PT4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DUX3Q96PT4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
DUX3Q96PT4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DUX3Q96PT4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
DUX3Q96PT4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DUX3Q96PT4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DUX3Q96PT4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
DUX3Q96PT4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DUX3Q96PT4 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.43■□□□□ 0.22
DUX3Q96PT4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DUX3Q96PT4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.43■□□□□ 0.22
DUX3Q96PT4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.43■□□□□ 0.22
DUX3Q96PT4 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.43■□□□□ 0.22
DUX3Q96PT4 HLA-L-209ENST00000420110 1011 ntBASIC16.43■□□□□ 0.22
DUX3Q96PT4 AL034346.1-201ENST00000568244 1277 ntBASIC16.43■□□□□ 0.22
DUX3Q96PT4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.43■□□□□ 0.22
DUX3Q96PT4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.43■□□□□ 0.22
DUX3Q96PT4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
DUX3Q96PT4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DUX3Q96PT4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
DUX3Q96PT4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.43■□□□□ 0.22
DUX3Q96PT4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DUX3Q96PT4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DUX3Q96PT4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DUX3Q96PT4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX3Q96PT4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.42■□□□□ 0.22
DUX3Q96PT4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
DUX3Q96PT4 AC068473.5-201ENST00000616428 2072 ntBASIC16.42■□□□□ 0.22
DUX3Q96PT4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX3Q96PT4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
DUX3Q96PT4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DUX3Q96PT4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX3Q96PT4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX3Q96PT4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX3Q96PT4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX3Q96PT4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX3Q96PT4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.42■□□□□ 0.22
DUX3Q96PT4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX3Q96PT4 AC026185.1-201ENST00000445748 174 ntBASIC16.42■□□□□ 0.22
DUX3Q96PT4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.42■□□□□ 0.22
DUX3Q96PT4 MFSD11-216ENST00000590393 1141 ntBASIC16.42■□□□□ 0.22
DUX3Q96PT4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX3Q96PT4 RAP2CP1-201ENST00000605103 478 ntBASIC16.42■□□□□ 0.22
DUX3Q96PT4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.42■□□□□ 0.22
DUX3Q96PT4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX3Q96PT4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
DUX3Q96PT4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DUX3Q96PT4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DUX3Q96PT4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
DUX3Q96PT4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DUX3Q96PT4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX3Q96PT4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
DUX3Q96PT4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX3Q96PT4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
DUX3Q96PT4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX3Q96PT4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DUX3Q96PT4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUX3Q96PT4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
DUX3Q96PT4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUX3Q96PT4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.41■□□□□ 0.22
DUX3Q96PT4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
DUX3Q96PT4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.41■□□□□ 0.22
DUX3Q96PT4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
DUX3Q96PT4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.41■□□□□ 0.22
DUX3Q96PT4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
DUX3Q96PT4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.41■□□□□ 0.22
DUX3Q96PT4 KRT18P11-201ENST00000435214 1283 ntBASIC16.41■□□□□ 0.22
DUX3Q96PT4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms