Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LRRC46Q96FV0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRC46Q96FV0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC46Q96FV0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC46Q96FV0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRC46Q96FV0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC46Q96FV0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19■□□□□ 0.63
LRRC46Q96FV0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19■□□□□ 0.63
LRRC46Q96FV0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC46Q96FV0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRC46Q96FV0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19■□□□□ 0.63
LRRC46Q96FV0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19■□□□□ 0.63
LRRC46Q96FV0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19■□□□□ 0.63
LRRC46Q96FV0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19■□□□□ 0.63
LRRC46Q96FV0 KRT18P61-201ENST00000585825 1298 ntBASIC19■□□□□ 0.63
LRRC46Q96FV0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
LRRC46Q96FV0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
LRRC46Q96FV0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC46Q96FV0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
LRRC46Q96FV0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC46Q96FV0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC46Q96FV0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19■□□□□ 0.63
LRRC46Q96FV0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC46Q96FV0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC46Q96FV0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19■□□□□ 0.63
LRRC46Q96FV0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
LRRC46Q96FV0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC46Q96FV0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.99■□□□□ 0.63
LRRC46Q96FV0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC46Q96FV0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC46Q96FV0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
LRRC46Q96FV0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC46Q96FV0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC46Q96FV0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC46Q96FV0 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.99■□□□□ 0.63
LRRC46Q96FV0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRC46Q96FV0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LRRC46Q96FV0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC46Q96FV0 RAP2CP1-201ENST00000605103 478 ntBASIC18.99■□□□□ 0.63
LRRC46Q96FV0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC46Q96FV0 AL109923.1-201ENST00000618799 583 ntBASIC18.99■□□□□ 0.63
LRRC46Q96FV0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.99■□□□□ 0.63
LRRC46Q96FV0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC46Q96FV0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC46Q96FV0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC46Q96FV0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC46Q96FV0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRC46Q96FV0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC46Q96FV0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC46Q96FV0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC46Q96FV0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC46Q96FV0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC46Q96FV0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRC46Q96FV0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC46Q96FV0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.98■□□□□ 0.63
LRRC46Q96FV0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC46Q96FV0 AC231657.2-201ENST00000624556 255 ntBASIC18.98■□□□□ 0.63
LRRC46Q96FV0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC46Q96FV0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC46Q96FV0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC46Q96FV0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
LRRC46Q96FV0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC46Q96FV0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC46Q96FV0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRC46Q96FV0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRC46Q96FV0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC46Q96FV0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC46Q96FV0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC46Q96FV0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC46Q96FV0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.97■□□□□ 0.63
LRRC46Q96FV0 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.97■□□□□ 0.63
LRRC46Q96FV0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
LRRC46Q96FV0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC46Q96FV0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC46Q96FV0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
LRRC46Q96FV0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC46Q96FV0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC46Q96FV0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
LRRC46Q96FV0 DUSP8P3-201ENST00000399571 1760 ntBASIC18.96■□□□□ 0.63
LRRC46Q96FV0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC46Q96FV0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC46Q96FV0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC46Q96FV0 GPX1P1-201ENST00000388829 606 ntBASIC18.96■□□□□ 0.63
LRRC46Q96FV0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.96■□□□□ 0.63
LRRC46Q96FV0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC46Q96FV0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.96■□□□□ 0.63
LRRC46Q96FV0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.96■□□□□ 0.63
LRRC46Q96FV0 AL034346.1-201ENST00000568244 1277 ntBASIC18.96■□□□□ 0.63
LRRC46Q96FV0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LRRC46Q96FV0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC46Q96FV0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC46Q96FV0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.96■□□□□ 0.63
LRRC46Q96FV0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC46Q96FV0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC46Q96FV0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC46Q96FV0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
LRRC46Q96FV0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.96■□□□□ 0.63
LRRC46Q96FV0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.96■□□□□ 0.63
LRRC46Q96FV0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC46Q96FV0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms