Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTHRC1Q96CG8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CTHRC1Q96CG8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTHRC1Q96CG8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
CTHRC1Q96CG8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTHRC1Q96CG8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTHRC1Q96CG8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTHRC1Q96CG8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTHRC1Q96CG8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTHRC1Q96CG8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CTHRC1Q96CG8 Z98882.1-201ENST00000622160 2253 ntBASIC19.74■□□□□ 0.75
CTHRC1Q96CG8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.74■□□□□ 0.75
CTHRC1Q96CG8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CTHRC1Q96CG8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTHRC1Q96CG8 KRT87P-202ENST00000534226 1464 ntBASIC19.74■□□□□ 0.75
CTHRC1Q96CG8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTHRC1Q96CG8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CTHRC1Q96CG8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.74■□□□□ 0.75
CTHRC1Q96CG8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTHRC1Q96CG8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.74■□□□□ 0.75
CTHRC1Q96CG8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTHRC1Q96CG8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTHRC1Q96CG8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CTHRC1Q96CG8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.74■□□□□ 0.75
CTHRC1Q96CG8 KRT18P14-201ENST00000534205 1250 ntBASIC19.74■□□□□ 0.75
CTHRC1Q96CG8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.74■□□□□ 0.75
CTHRC1Q96CG8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTHRC1Q96CG8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTHRC1Q96CG8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.74■□□□□ 0.75
CTHRC1Q96CG8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTHRC1Q96CG8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTHRC1Q96CG8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTHRC1Q96CG8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CTHRC1Q96CG8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTHRC1Q96CG8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTHRC1Q96CG8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTHRC1Q96CG8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.73■□□□□ 0.75
CTHRC1Q96CG8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTHRC1Q96CG8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTHRC1Q96CG8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.73■□□□□ 0.75
CTHRC1Q96CG8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.73■□□□□ 0.75
CTHRC1Q96CG8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTHRC1Q96CG8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTHRC1Q96CG8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTHRC1Q96CG8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.73■□□□□ 0.75
CTHRC1Q96CG8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTHRC1Q96CG8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTHRC1Q96CG8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CTHRC1Q96CG8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTHRC1Q96CG8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTHRC1Q96CG8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTHRC1Q96CG8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.72■□□□□ 0.75
CTHRC1Q96CG8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.72■□□□□ 0.75
CTHRC1Q96CG8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.72■□□□□ 0.75
CTHRC1Q96CG8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTHRC1Q96CG8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTHRC1Q96CG8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTHRC1Q96CG8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CTHRC1Q96CG8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.72■□□□□ 0.75
CTHRC1Q96CG8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.72■□□□□ 0.75
CTHRC1Q96CG8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTHRC1Q96CG8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTHRC1Q96CG8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 DUX4L2-201ENST00000561772 1275 ntBASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 DUX4L6-201ENST00000626483 1275 ntBASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 DUX4L1-201ENST00000627662 1275 ntBASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 DUX4L8-201ENST00000629013 1275 ntBASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 DUX4L3-201ENST00000630187 1275 ntBASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 DUX4L7-201ENST00000630678 1275 ntBASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 DUX4L5-201ENST00000630834 1275 ntBASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTHRC1Q96CG8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CTHRC1Q96CG8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTHRC1Q96CG8 AC026310.3-201ENST00000625186 2373 ntBASIC19.7■□□□□ 0.74
CTHRC1Q96CG8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.7■□□□□ 0.74
CTHRC1Q96CG8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTHRC1Q96CG8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.7■□□□□ 0.74
CTHRC1Q96CG8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.7■□□□□ 0.74
CTHRC1Q96CG8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CTHRC1Q96CG8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.7■□□□□ 0.74
CTHRC1Q96CG8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.7■□□□□ 0.74
CTHRC1Q96CG8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.7■□□□□ 0.74
CTHRC1Q96CG8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTHRC1Q96CG8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms