Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
RFT1Q96AA3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.67■□□□□ 0.58
RFT1Q96AA3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RFT1Q96AA3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
RFT1Q96AA3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.67■□□□□ 0.58
RFT1Q96AA3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFT1Q96AA3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.67■□□□□ 0.58
RFT1Q96AA3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RFT1Q96AA3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.67■□□□□ 0.58
RFT1Q96AA3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.67■□□□□ 0.58
RFT1Q96AA3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.67■□□□□ 0.58
RFT1Q96AA3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RFT1Q96AA3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RFT1Q96AA3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFT1Q96AA3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.67■□□□□ 0.58
RFT1Q96AA3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.67■□□□□ 0.58
RFT1Q96AA3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFT1Q96AA3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFT1Q96AA3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFT1Q96AA3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFT1Q96AA3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFT1Q96AA3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFT1Q96AA3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFT1Q96AA3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFT1Q96AA3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFT1Q96AA3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFT1Q96AA3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.66■□□□□ 0.58
RFT1Q96AA3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFT1Q96AA3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFT1Q96AA3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFT1Q96AA3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFT1Q96AA3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
RFT1Q96AA3 AC006455.2-201ENST00000429931 906 ntBASIC18.66■□□□□ 0.58
RFT1Q96AA3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.66■□□□□ 0.58
RFT1Q96AA3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFT1Q96AA3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFT1Q96AA3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.66■□□□□ 0.58
RFT1Q96AA3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFT1Q96AA3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFT1Q96AA3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFT1Q96AA3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFT1Q96AA3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFT1Q96AA3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFT1Q96AA3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.65■□□□□ 0.58
RFT1Q96AA3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RFT1Q96AA3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RFT1Q96AA3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFT1Q96AA3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RFT1Q96AA3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RFT1Q96AA3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
RFT1Q96AA3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFT1Q96AA3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.65■□□□□ 0.58
RFT1Q96AA3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.65■□□□□ 0.58
RFT1Q96AA3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.65■□□□□ 0.58
RFT1Q96AA3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.65■□□□□ 0.58
RFT1Q96AA3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.65■□□□□ 0.58
RFT1Q96AA3 AL499627.2-201ENST00000606283 725 ntBASIC18.65■□□□□ 0.58
RFT1Q96AA3 AL035685.1-201ENST00000636663 812 ntBASIC18.65■□□□□ 0.58
RFT1Q96AA3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
RFT1Q96AA3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RFT1Q96AA3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFT1Q96AA3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFT1Q96AA3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
RFT1Q96AA3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
RFT1Q96AA3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFT1Q96AA3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFT1Q96AA3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFT1Q96AA3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFT1Q96AA3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFT1Q96AA3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFT1Q96AA3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFT1Q96AA3 CA15P2-201ENST00000611168 834 ntBASIC18.64■□□□□ 0.57
RFT1Q96AA3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.64■□□□□ 0.57
RFT1Q96AA3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFT1Q96AA3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFT1Q96AA3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFT1Q96AA3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.64■□□□□ 0.57
RFT1Q96AA3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFT1Q96AA3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFT1Q96AA3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFT1Q96AA3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.64■□□□□ 0.57
RFT1Q96AA3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFT1Q96AA3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFT1Q96AA3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
RFT1Q96AA3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFT1Q96AA3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFT1Q96AA3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.63■□□□□ 0.57
RFT1Q96AA3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFT1Q96AA3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.63■□□□□ 0.57
RFT1Q96AA3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RFT1Q96AA3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFT1Q96AA3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFT1Q96AA3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFT1Q96AA3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFT1Q96AA3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFT1Q96AA3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFT1Q96AA3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.63■□□□□ 0.57
RFT1Q96AA3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFT1Q96AA3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.63■□□□□ 0.57
RFT1Q96AA3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms