Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTP4A1Q93096 SERBP1P1-201ENST00000396021 1160 ntBASIC19.02■□□□□ 0.64
PTP4A1Q93096 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.02■□□□□ 0.64
PTP4A1Q93096 AL034346.1-201ENST00000568244 1277 ntBASIC19.02■□□□□ 0.64
PTP4A1Q93096 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PTP4A1Q93096 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTP4A1Q93096 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTP4A1Q93096 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTP4A1Q93096 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.02■□□□□ 0.63
PTP4A1Q93096 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.02■□□□□ 0.63
PTP4A1Q93096 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.02■□□□□ 0.63
PTP4A1Q93096 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PTP4A1Q93096 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTP4A1Q93096 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTP4A1Q93096 AL049796.1-201ENST00000565336 1766 ntBASIC19.01■□□□□ 0.63
PTP4A1Q93096 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTP4A1Q93096 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTP4A1Q93096 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
PTP4A1Q93096 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
PTP4A1Q93096 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PTP4A1Q93096 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.01■□□□□ 0.63
PTP4A1Q93096 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.01■□□□□ 0.63
PTP4A1Q93096 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTP4A1Q93096 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTP4A1Q93096 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTP4A1Q93096 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTP4A1Q93096 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
PTP4A1Q93096 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
PTP4A1Q93096 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.01■□□□□ 0.63
PTP4A1Q93096 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.01■□□□□ 0.63
PTP4A1Q93096 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTP4A1Q93096 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PTP4A1Q93096 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PTP4A1Q93096 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTP4A1Q93096 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PTP4A1Q93096 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19■□□□□ 0.63
PTP4A1Q93096 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTP4A1Q93096 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19■□□□□ 0.63
PTP4A1Q93096 AP005435.1-201ENST00000529293 1178 ntBASIC19■□□□□ 0.63
PTP4A1Q93096 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19■□□□□ 0.63
PTP4A1Q93096 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19■□□□□ 0.63
PTP4A1Q93096 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PTP4A1Q93096 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTP4A1Q93096 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
PTP4A1Q93096 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTP4A1Q93096 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19■□□□□ 0.63
PTP4A1Q93096 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTP4A1Q93096 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19■□□□□ 0.63
PTP4A1Q93096 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTP4A1Q93096 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PTP4A1Q93096 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTP4A1Q93096 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTP4A1Q93096 UNC93B3-201ENST00000308076 687 ntBASIC18.99■□□□□ 0.63
PTP4A1Q93096 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTP4A1Q93096 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PTP4A1Q93096 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTP4A1Q93096 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.99■□□□□ 0.63
PTP4A1Q93096 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTP4A1Q93096 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.99■□□□□ 0.63
PTP4A1Q93096 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PTP4A1Q93096 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTP4A1Q93096 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.99■□□□□ 0.63
PTP4A1Q93096 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
PTP4A1Q93096 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTP4A1Q93096 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTP4A1Q93096 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTP4A1Q93096 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PTP4A1Q93096 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTP4A1Q93096 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTP4A1Q93096 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.99■□□□□ 0.63
PTP4A1Q93096 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTP4A1Q93096 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.98■□□□□ 0.63
PTP4A1Q93096 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTP4A1Q93096 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTP4A1Q93096 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTP4A1Q93096 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTP4A1Q93096 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.98■□□□□ 0.63
PTP4A1Q93096 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PTP4A1Q93096 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PTP4A1Q93096 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTP4A1Q93096 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.98■□□□□ 0.63
PTP4A1Q93096 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTP4A1Q93096 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTP4A1Q93096 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.98■□□□□ 0.63
PTP4A1Q93096 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTP4A1Q93096 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.98■□□□□ 0.63
PTP4A1Q93096 AC011298.3-201ENST00000615796 283 ntBASIC18.98■□□□□ 0.63
PTP4A1Q93096 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTP4A1Q93096 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTP4A1Q93096 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTP4A1Q93096 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTP4A1Q93096 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTP4A1Q93096 LINC01521-201ENST00000504184 1943 ntBASIC18.98■□□□□ 0.63
PTP4A1Q93096 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.98■□□□□ 0.63
PTP4A1Q93096 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTP4A1Q93096 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTP4A1Q93096 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTP4A1Q93096 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.97■□□□□ 0.63
PTP4A1Q93096 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTP4A1Q93096 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms