Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF4Q92544 RAP2CP1-201ENST00000605103 478 ntBASIC19.99■□□□□ 0.79
TM9SF4Q92544 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF4Q92544 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF4Q92544 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.98■□□□□ 0.79
TM9SF4Q92544 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.98■□□□□ 0.79
TM9SF4Q92544 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF4Q92544 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF4Q92544 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF4Q92544 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.98■□□□□ 0.79
TM9SF4Q92544 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF4Q92544 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.98■□□□□ 0.79
TM9SF4Q92544 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF4Q92544 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.98■□□□□ 0.79
TM9SF4Q92544 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.98■□□□□ 0.79
TM9SF4Q92544 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF4Q92544 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.98■□□□□ 0.79
TM9SF4Q92544 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF4Q92544 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF4Q92544 AC139530.1-201ENST00000575312 1977 ntBASIC19.97■□□□□ 0.79
TM9SF4Q92544 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TM9SF4Q92544 AC009237.3-201ENST00000393279 1427 ntBASIC19.97■□□□□ 0.79
TM9SF4Q92544 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.97■□□□□ 0.79
TM9SF4Q92544 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.97■□□□□ 0.79
TM9SF4Q92544 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.97■□□□□ 0.79
TM9SF4Q92544 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF4Q92544 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TM9SF4Q92544 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TM9SF4Q92544 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF4Q92544 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF4Q92544 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF4Q92544 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TM9SF4Q92544 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF4Q92544 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF4Q92544 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF4Q92544 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF4Q92544 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF4Q92544 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF4Q92544 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF4Q92544 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.96■□□□□ 0.79
TM9SF4Q92544 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.96■□□□□ 0.79
TM9SF4Q92544 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
TM9SF4Q92544 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
TM9SF4Q92544 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF4Q92544 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF4Q92544 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF4Q92544 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TM9SF4Q92544 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF4Q92544 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF4Q92544 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF4Q92544 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.96■□□□□ 0.79
TM9SF4Q92544 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM9SF4Q92544 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TM9SF4Q92544 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.95■□□□□ 0.78
TM9SF4Q92544 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM9SF4Q92544 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.95■□□□□ 0.78
TM9SF4Q92544 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.95■□□□□ 0.78
TM9SF4Q92544 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.95■□□□□ 0.78
TM9SF4Q92544 AC011767.1-201ENST00000617410 1153 ntBASIC19.95■□□□□ 0.78
TM9SF4Q92544 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM9SF4Q92544 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.95■□□□□ 0.78
TM9SF4Q92544 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM9SF4Q92544 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM9SF4Q92544 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.95■□□□□ 0.78
TM9SF4Q92544 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
TM9SF4Q92544 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TM9SF4Q92544 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM9SF4Q92544 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.94■□□□□ 0.78
TM9SF4Q92544 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM9SF4Q92544 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM9SF4Q92544 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
TM9SF4Q92544 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM9SF4Q92544 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TM9SF4Q92544 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM9SF4Q92544 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM9SF4Q92544 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TM9SF4Q92544 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TM9SF4Q92544 KRT87P-202ENST00000534226 1464 ntBASIC19.93■□□□□ 0.78
TM9SF4Q92544 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TM9SF4Q92544 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM9SF4Q92544 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM9SF4Q92544 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM9SF4Q92544 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM9SF4Q92544 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TM9SF4Q92544 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.93■□□□□ 0.78
TM9SF4Q92544 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.93■□□□□ 0.78
TM9SF4Q92544 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM9SF4Q92544 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM9SF4Q92544 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TM9SF4Q92544 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.93■□□□□ 0.78
TM9SF4Q92544 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TM9SF4Q92544 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TM9SF4Q92544 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TM9SF4Q92544 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TM9SF4Q92544 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM9SF4Q92544 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.92■□□□□ 0.78
TM9SF4Q92544 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TM9SF4Q92544 AL109923.1-201ENST00000618799 583 ntBASIC19.92■□□□□ 0.78
TM9SF4Q92544 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM9SF4Q92544 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms