Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHC3Q92529 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHC3Q92529 AC005229.4-201ENST00000610085 2198 ntBASIC22.68■■□□□ 1.22
SHC3Q92529 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
SHC3Q92529 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.68■■□□□ 1.22
SHC3Q92529 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SHC3Q92529 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.68■■□□□ 1.22
SHC3Q92529 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.68■■□□□ 1.22
SHC3Q92529 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SHC3Q92529 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.68■■□□□ 1.22
SHC3Q92529 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
SHC3Q92529 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHC3Q92529 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.68■■□□□ 1.22
SHC3Q92529 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.68■■□□□ 1.22
SHC3Q92529 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHC3Q92529 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SHC3Q92529 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHC3Q92529 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHC3Q92529 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.67■■□□□ 1.22
SHC3Q92529 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SHC3Q92529 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.67■■□□□ 1.22
SHC3Q92529 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
SHC3Q92529 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SHC3Q92529 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SHC3Q92529 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SHC3Q92529 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.67■■□□□ 1.22
SHC3Q92529 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.67■■□□□ 1.22
SHC3Q92529 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SHC3Q92529 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.67■■□□□ 1.22
SHC3Q92529 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.67■■□□□ 1.22
SHC3Q92529 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.67■■□□□ 1.22
SHC3Q92529 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SHC3Q92529 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SHC3Q92529 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHC3Q92529 AL024507.2-201ENST00000606070 2574 ntBASIC22.66■■□□□ 1.22
SHC3Q92529 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SHC3Q92529 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.66■■□□□ 1.22
SHC3Q92529 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHC3Q92529 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHC3Q92529 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SHC3Q92529 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.66■■□□□ 1.22
SHC3Q92529 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.66■■□□□ 1.22
SHC3Q92529 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHC3Q92529 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
SHC3Q92529 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.66■■□□□ 1.22
SHC3Q92529 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.65■■□□□ 1.22
SHC3Q92529 AF106564.1-201ENST00000607058 2553 ntBASIC22.65■■□□□ 1.22
SHC3Q92529 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.65■■□□□ 1.22
SHC3Q92529 AC027612.3-201ENST00000413684 1047 ntBASIC22.65■■□□□ 1.22
SHC3Q92529 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SHC3Q92529 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.65■■□□□ 1.22
SHC3Q92529 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.65■■□□□ 1.22
SHC3Q92529 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
SHC3Q92529 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.65■■□□□ 1.22
SHC3Q92529 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.65■■□□□ 1.22
SHC3Q92529 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SHC3Q92529 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.65■■□□□ 1.22
SHC3Q92529 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.65■■□□□ 1.22
SHC3Q92529 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
SHC3Q92529 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.64■■□□□ 1.22
SHC3Q92529 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SHC3Q92529 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.64■■□□□ 1.22
SHC3Q92529 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SHC3Q92529 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SHC3Q92529 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.64■■□□□ 1.21
SHC3Q92529 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SHC3Q92529 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SHC3Q92529 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.63■■□□□ 1.21
SHC3Q92529 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SHC3Q92529 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SHC3Q92529 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
SHC3Q92529 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SHC3Q92529 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.63■■□□□ 1.21
SHC3Q92529 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
SHC3Q92529 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SHC3Q92529 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SHC3Q92529 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.63■■□□□ 1.21
SHC3Q92529 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.63■■□□□ 1.21
SHC3Q92529 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.63■■□□□ 1.21
SHC3Q92529 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SHC3Q92529 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHC3Q92529 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHC3Q92529 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHC3Q92529 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHC3Q92529 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.62■■□□□ 1.21
SHC3Q92529 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SHC3Q92529 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHC3Q92529 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.62■■□□□ 1.21
SHC3Q92529 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SHC3Q92529 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHC3Q92529 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHC3Q92529 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.62■■□□□ 1.21
SHC3Q92529 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
SHC3Q92529 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHC3Q92529 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
SHC3Q92529 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.62■■□□□ 1.21
SHC3Q92529 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SHC3Q92529 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHC3Q92529 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHC3Q92529 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms