Protein–RNA interactions for Protein: Q8WVM8

SCFD1, Sec1 family domain-containing protein 1, humanhuman

Predictions only

Length 642 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1Q8WVM8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.35■■□□□ 1.33
SCFD1Q8WVM8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SCFD1Q8WVM8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.35■■□□□ 1.33
SCFD1Q8WVM8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCFD1Q8WVM8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCFD1Q8WVM8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.35■■□□□ 1.33
SCFD1Q8WVM8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SCFD1Q8WVM8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SCFD1Q8WVM8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
SCFD1Q8WVM8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCFD1Q8WVM8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.35■■□□□ 1.33
SCFD1Q8WVM8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.35■■□□□ 1.33
SCFD1Q8WVM8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCFD1Q8WVM8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCFD1Q8WVM8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
SCFD1Q8WVM8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCFD1Q8WVM8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCFD1Q8WVM8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.35■■□□□ 1.33
SCFD1Q8WVM8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.35■■□□□ 1.33
SCFD1Q8WVM8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
SCFD1Q8WVM8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SCFD1Q8WVM8 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.34■■□□□ 1.33
SCFD1Q8WVM8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SCFD1Q8WVM8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
SCFD1Q8WVM8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.34■■□□□ 1.33
SCFD1Q8WVM8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.34■■□□□ 1.33
SCFD1Q8WVM8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
SCFD1Q8WVM8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.34■■□□□ 1.33
SCFD1Q8WVM8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.34■■□□□ 1.33
SCFD1Q8WVM8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.33■■□□□ 1.33
SCFD1Q8WVM8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
SCFD1Q8WVM8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.33■■□□□ 1.33
SCFD1Q8WVM8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SCFD1Q8WVM8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
SCFD1Q8WVM8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
SCFD1Q8WVM8 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.33■■□□□ 1.33
SCFD1Q8WVM8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SCFD1Q8WVM8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
SCFD1Q8WVM8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SCFD1Q8WVM8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SCFD1Q8WVM8 FEM1AP4-201ENST00000443167 1987 ntBASIC23.32■■□□□ 1.32
SCFD1Q8WVM8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.32■■□□□ 1.32
SCFD1Q8WVM8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
SCFD1Q8WVM8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SCFD1Q8WVM8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.32■■□□□ 1.32
SCFD1Q8WVM8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SCFD1Q8WVM8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SCFD1Q8WVM8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.32■■□□□ 1.32
SCFD1Q8WVM8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.32■■□□□ 1.32
SCFD1Q8WVM8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.32■■□□□ 1.32
SCFD1Q8WVM8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.32■■□□□ 1.32
SCFD1Q8WVM8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.32■■□□□ 1.32
SCFD1Q8WVM8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
SCFD1Q8WVM8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
SCFD1Q8WVM8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SCFD1Q8WVM8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SCFD1Q8WVM8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.31■■□□□ 1.32
SCFD1Q8WVM8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
SCFD1Q8WVM8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
SCFD1Q8WVM8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SCFD1Q8WVM8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.31■■□□□ 1.32
SCFD1Q8WVM8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SCFD1Q8WVM8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SCFD1Q8WVM8 AC005229.4-201ENST00000610085 2198 ntBASIC23.31■■□□□ 1.32
SCFD1Q8WVM8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SCFD1Q8WVM8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 AF106564.1-201ENST00000607058 2553 ntBASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SCFD1Q8WVM8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.29■■□□□ 1.32
SCFD1Q8WVM8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SCFD1Q8WVM8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
SCFD1Q8WVM8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.29■■□□□ 1.32
SCFD1Q8WVM8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SCFD1Q8WVM8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms