Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHKBP1Q8TBC3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHKBP1Q8TBC3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHKBP1Q8TBC3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
SHKBP1Q8TBC3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.31■■□□□ 1.16
SHKBP1Q8TBC3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SHKBP1Q8TBC3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SHKBP1Q8TBC3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHKBP1Q8TBC3 EEF1DP3-203ENST00000566025 782 ntBASIC22.31■■□□□ 1.16
SHKBP1Q8TBC3 AC010536.3-201ENST00000620306 533 ntBASIC22.31■■□□□ 1.16
SHKBP1Q8TBC3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.31■■□□□ 1.16
SHKBP1Q8TBC3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.31■■□□□ 1.16
SHKBP1Q8TBC3 AC087742.1-201ENST00000575880 1738 ntBASIC22.31■■□□□ 1.16
SHKBP1Q8TBC3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHKBP1Q8TBC3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SHKBP1Q8TBC3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.31■■□□□ 1.16
SHKBP1Q8TBC3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHKBP1Q8TBC3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHKBP1Q8TBC3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHKBP1Q8TBC3 AC233723.2-201ENST00000623798 2106 ntBASIC22.3■■□□□ 1.16
SHKBP1Q8TBC3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHKBP1Q8TBC3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
SHKBP1Q8TBC3 AC137767.1-201ENST00000602918 1920 ntBASIC22.3■■□□□ 1.16
SHKBP1Q8TBC3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SHKBP1Q8TBC3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SHKBP1Q8TBC3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.3■■□□□ 1.16
SHKBP1Q8TBC3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
SHKBP1Q8TBC3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHKBP1Q8TBC3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.3■■□□□ 1.16
SHKBP1Q8TBC3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
SHKBP1Q8TBC3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
SHKBP1Q8TBC3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHKBP1Q8TBC3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHKBP1Q8TBC3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
SHKBP1Q8TBC3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHKBP1Q8TBC3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHKBP1Q8TBC3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
SHKBP1Q8TBC3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.29■■□□□ 1.16
SHKBP1Q8TBC3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHKBP1Q8TBC3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.29■■□□□ 1.16
SHKBP1Q8TBC3 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.29■■□□□ 1.16
SHKBP1Q8TBC3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SHKBP1Q8TBC3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.29■■□□□ 1.16
SHKBP1Q8TBC3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHKBP1Q8TBC3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHKBP1Q8TBC3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.29■■□□□ 1.16
SHKBP1Q8TBC3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.29■■□□□ 1.16
SHKBP1Q8TBC3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHKBP1Q8TBC3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SHKBP1Q8TBC3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHKBP1Q8TBC3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SHKBP1Q8TBC3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHKBP1Q8TBC3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.28■■□□□ 1.16
SHKBP1Q8TBC3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
SHKBP1Q8TBC3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.28■■□□□ 1.16
SHKBP1Q8TBC3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHKBP1Q8TBC3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.28■■□□□ 1.16
SHKBP1Q8TBC3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.28■■□□□ 1.16
SHKBP1Q8TBC3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.28■■□□□ 1.16
SHKBP1Q8TBC3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.28■■□□□ 1.16
SHKBP1Q8TBC3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
SHKBP1Q8TBC3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.27■■□□□ 1.16
SHKBP1Q8TBC3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SHKBP1Q8TBC3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHKBP1Q8TBC3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHKBP1Q8TBC3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SHKBP1Q8TBC3 ABHD17AP1-201ENST00000358206 933 ntBASIC22.27■■□□□ 1.16
SHKBP1Q8TBC3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SHKBP1Q8TBC3 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.27■■□□□ 1.16
SHKBP1Q8TBC3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.27■■□□□ 1.16
SHKBP1Q8TBC3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.27■■□□□ 1.16
SHKBP1Q8TBC3 AC053503.5-201ENST00000601508 636 ntBASIC22.27■■□□□ 1.16
SHKBP1Q8TBC3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHKBP1Q8TBC3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHKBP1Q8TBC3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHKBP1Q8TBC3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHKBP1Q8TBC3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHKBP1Q8TBC3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
SHKBP1Q8TBC3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SHKBP1Q8TBC3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.26■■□□□ 1.15
SHKBP1Q8TBC3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHKBP1Q8TBC3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.26■■□□□ 1.15
SHKBP1Q8TBC3 AL138781.1-201ENST00000566567 1274 ntBASIC22.26■■□□□ 1.15
SHKBP1Q8TBC3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SHKBP1Q8TBC3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHKBP1Q8TBC3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SHKBP1Q8TBC3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
SHKBP1Q8TBC3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SHKBP1Q8TBC3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHKBP1Q8TBC3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHKBP1Q8TBC3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHKBP1Q8TBC3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHKBP1Q8TBC3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.26■■□□□ 1.15
SHKBP1Q8TBC3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SHKBP1Q8TBC3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
SHKBP1Q8TBC3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHKBP1Q8TBC3 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.25■■□□□ 1.15
SHKBP1Q8TBC3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SHKBP1Q8TBC3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.25■■□□□ 1.15
SHKBP1Q8TBC3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms