Protein–RNA interactions for Protein: Q8TBB1

LNX1, E3 ubiquitin-protein ligase LNX, humanhuman

Predicted RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1Q8TBB1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
LNX1Q8TBB1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LNX1Q8TBB1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.15■■□□□ 1.3
LNX1Q8TBB1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.15■■□□□ 1.3
LNX1Q8TBB1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
LNX1Q8TBB1 AL137060.1-201ENST00000618151 2648 ntBASIC23.14■■□□□ 1.3
LNX1Q8TBB1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
LNX1Q8TBB1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LNX1Q8TBB1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
LNX1Q8TBB1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LNX1Q8TBB1 AC016769.1-201ENST00000409132 1010 ntBASIC23.14■■□□□ 1.29
LNX1Q8TBB1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.14■■□□□ 1.29
LNX1Q8TBB1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
LNX1Q8TBB1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LNX1Q8TBB1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
LNX1Q8TBB1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
LNX1Q8TBB1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LNX1Q8TBB1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LNX1Q8TBB1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
LNX1Q8TBB1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
LNX1Q8TBB1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LNX1Q8TBB1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
LNX1Q8TBB1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.13■■□□□ 1.29
LNX1Q8TBB1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LNX1Q8TBB1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
LNX1Q8TBB1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.13■■□□□ 1.29
LNX1Q8TBB1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LNX1Q8TBB1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.13■■□□□ 1.29
LNX1Q8TBB1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.13■■□□□ 1.29
LNX1Q8TBB1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LNX1Q8TBB1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LNX1Q8TBB1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
LNX1Q8TBB1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LNX1Q8TBB1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
LNX1Q8TBB1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LNX1Q8TBB1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.12■■□□□ 1.29
LNX1Q8TBB1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.12■■□□□ 1.29
LNX1Q8TBB1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LNX1Q8TBB1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LNX1Q8TBB1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LNX1Q8TBB1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.12■■□□□ 1.29
LNX1Q8TBB1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LNX1Q8TBB1 ID1-201ENST00000376105 1233 ntBASIC23.12■■□□□ 1.29
LNX1Q8TBB1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.12■■□□□ 1.29
LNX1Q8TBB1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
LNX1Q8TBB1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LNX1Q8TBB1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
LNX1Q8TBB1 AC079089.2-201ENST00000531211 1277 ntBASIC23.12■■□□□ 1.29
LNX1Q8TBB1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
LNX1Q8TBB1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.12■■□□□ 1.29
LNX1Q8TBB1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
LNX1Q8TBB1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
LNX1Q8TBB1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LNX1Q8TBB1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
LNX1Q8TBB1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LNX1Q8TBB1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.12■■□□□ 1.29
LNX1Q8TBB1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LNX1Q8TBB1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LNX1Q8TBB1 KRT19P1-201ENST00000405746 1186 ntBASIC23.11■■□□□ 1.29
LNX1Q8TBB1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LNX1Q8TBB1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.11■■□□□ 1.29
LNX1Q8TBB1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.11■■□□□ 1.29
LNX1Q8TBB1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LNX1Q8TBB1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LNX1Q8TBB1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
LNX1Q8TBB1 AC026310.3-201ENST00000625186 2373 ntBASIC23.11■■□□□ 1.29
LNX1Q8TBB1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LNX1Q8TBB1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
LNX1Q8TBB1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
LNX1Q8TBB1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.1■■□□□ 1.29
LNX1Q8TBB1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.1■■□□□ 1.29
LNX1Q8TBB1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
LNX1Q8TBB1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
LNX1Q8TBB1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
LNX1Q8TBB1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
LNX1Q8TBB1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.1■■□□□ 1.29
LNX1Q8TBB1 RAP2CP1-201ENST00000605103 478 ntBASIC23.1■■□□□ 1.29
LNX1Q8TBB1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.1■■□□□ 1.29
LNX1Q8TBB1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
LNX1Q8TBB1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LNX1Q8TBB1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LNX1Q8TBB1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.09■■□□□ 1.29
LNX1Q8TBB1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LNX1Q8TBB1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.09■■□□□ 1.29
LNX1Q8TBB1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.09■■□□□ 1.29
LNX1Q8TBB1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.09■■□□□ 1.29
LNX1Q8TBB1 CDCA4P2-201ENST00000441182 718 ntBASIC23.09■■□□□ 1.29
LNX1Q8TBB1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.09■■□□□ 1.29
LNX1Q8TBB1 AC079140.4-201ENST00000507448 529 ntBASIC23.09■■□□□ 1.29
LNX1Q8TBB1 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.09■■□□□ 1.29
LNX1Q8TBB1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LNX1Q8TBB1 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.09■■□□□ 1.29
LNX1Q8TBB1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LNX1Q8TBB1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LNX1Q8TBB1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LNX1Q8TBB1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.09■■□□□ 1.29
LNX1Q8TBB1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LNX1Q8TBB1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
LNX1Q8TBB1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.08■■□□□ 1.29
LNX1Q8TBB1 AC073111.5-205ENST00000641717 521 ntBASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms