Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AL354811.1-201ENST00000610286 706 ntBASIC21.92■■□□□ 1.1
PCDH19Q8TAB3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDH19Q8TAB3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH19Q8TAB3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH19Q8TAB3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDH19Q8TAB3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDH19Q8TAB3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH19Q8TAB3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH19Q8TAB3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PCDH19Q8TAB3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDH19Q8TAB3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDH19Q8TAB3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH19Q8TAB3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH19Q8TAB3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH19Q8TAB3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH19Q8TAB3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH19Q8TAB3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH19Q8TAB3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDH19Q8TAB3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDH19Q8TAB3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH19Q8TAB3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH19Q8TAB3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDH19Q8TAB3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH19Q8TAB3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH19Q8TAB3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH19Q8TAB3 AF106564.1-201ENST00000607058 2553 ntBASIC21.91■■□□□ 1.1
PCDH19Q8TAB3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH19Q8TAB3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH19Q8TAB3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH19Q8TAB3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH19Q8TAB3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH19Q8TAB3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH19Q8TAB3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH19Q8TAB3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDH19Q8TAB3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.9■■□□□ 1.1
PCDH19Q8TAB3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
PCDH19Q8TAB3 TPRG1LP1-201ENST00000598702 760 ntBASIC21.9■■□□□ 1.1
PCDH19Q8TAB3 MIR6084-201ENST00000622012 110 ntBASIC21.9■■□□□ 1.1
PCDH19Q8TAB3 AL358852.1-201ENST00000623174 1268 ntBASIC21.9■■□□□ 1.1
PCDH19Q8TAB3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH19Q8TAB3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH19Q8TAB3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH19Q8TAB3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.9■■□□□ 1.1
PCDH19Q8TAB3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PCDH19Q8TAB3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH19Q8TAB3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PCDH19Q8TAB3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.89■■□□□ 1.1
PCDH19Q8TAB3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.89■■□□□ 1.1
PCDH19Q8TAB3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.89■■□□□ 1.1
PCDH19Q8TAB3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
PCDH19Q8TAB3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
PCDH19Q8TAB3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDH19Q8TAB3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.89■■□□□ 1.09
PCDH19Q8TAB3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.89■■□□□ 1.09
PCDH19Q8TAB3 MIR6821-201ENST00000617625 74 ntBASIC21.89■■□□□ 1.09
PCDH19Q8TAB3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDH19Q8TAB3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDH19Q8TAB3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDH19Q8TAB3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
PCDH19Q8TAB3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.89■■□□□ 1.09
PCDH19Q8TAB3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH19Q8TAB3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH19Q8TAB3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PCDH19Q8TAB3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PCDH19Q8TAB3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH19Q8TAB3 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.88■■□□□ 1.09
PCDH19Q8TAB3 AC097381.1-201ENST00000429019 1296 ntBASIC21.88■■□□□ 1.09
PCDH19Q8TAB3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH19Q8TAB3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH19Q8TAB3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.88■■□□□ 1.09
PCDH19Q8TAB3 AC092666.2-201ENST00000613287 246 ntBASIC21.88■■□□□ 1.09
PCDH19Q8TAB3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
PCDH19Q8TAB3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH19Q8TAB3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH19Q8TAB3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH19Q8TAB3 AL024507.2-201ENST00000606070 2574 ntBASIC21.88■■□□□ 1.09
PCDH19Q8TAB3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDH19Q8TAB3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
PCDH19Q8TAB3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
PCDH19Q8TAB3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH19Q8TAB3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
PCDH19Q8TAB3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDH19Q8TAB3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDH19Q8TAB3 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.87■■□□□ 1.09
PCDH19Q8TAB3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH19Q8TAB3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH19Q8TAB3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH19Q8TAB3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH19Q8TAB3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDH19Q8TAB3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH19Q8TAB3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDH19Q8TAB3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PCDH19Q8TAB3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH19Q8TAB3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.86■■□□□ 1.09
PCDH19Q8TAB3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PCDH19Q8TAB3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH19Q8TAB3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH19Q8TAB3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH19Q8TAB3 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.86■■□□□ 1.09
PCDH19Q8TAB3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms