Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
RDH13Q8NBN7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RDH13Q8NBN7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RDH13Q8NBN7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RDH13Q8NBN7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.19■■□□□ 1.3
RDH13Q8NBN7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RDH13Q8NBN7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RDH13Q8NBN7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.19■■□□□ 1.3
RDH13Q8NBN7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RDH13Q8NBN7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.19■■□□□ 1.3
RDH13Q8NBN7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RDH13Q8NBN7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RDH13Q8NBN7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RDH13Q8NBN7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.19■■□□□ 1.3
RDH13Q8NBN7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RDH13Q8NBN7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RDH13Q8NBN7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RDH13Q8NBN7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RDH13Q8NBN7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RDH13Q8NBN7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RDH13Q8NBN7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.18■■□□□ 1.3
RDH13Q8NBN7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
RDH13Q8NBN7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RDH13Q8NBN7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
RDH13Q8NBN7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RDH13Q8NBN7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RDH13Q8NBN7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
RDH13Q8NBN7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.18■■□□□ 1.3
RDH13Q8NBN7 AC123595.1-201ENST00000440769 1046 ntBASIC23.18■■□□□ 1.3
RDH13Q8NBN7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.18■■□□□ 1.3
RDH13Q8NBN7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RDH13Q8NBN7 AC104564.3-201ENST00000582367 638 ntBASIC23.18■■□□□ 1.3
RDH13Q8NBN7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.18■■□□□ 1.3
RDH13Q8NBN7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RDH13Q8NBN7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RDH13Q8NBN7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RDH13Q8NBN7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.17■■□□□ 1.3
RDH13Q8NBN7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
RDH13Q8NBN7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RDH13Q8NBN7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
RDH13Q8NBN7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RDH13Q8NBN7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
RDH13Q8NBN7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RDH13Q8NBN7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
RDH13Q8NBN7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
RDH13Q8NBN7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RDH13Q8NBN7 CCDC92B-201ENST00000575506 885 ntBASIC23.17■■□□□ 1.3
RDH13Q8NBN7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RDH13Q8NBN7 AC007375.3-201ENST00000600936 2314 ntBASIC23.17■■□□□ 1.3
RDH13Q8NBN7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
RDH13Q8NBN7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RDH13Q8NBN7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
RDH13Q8NBN7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.17■■□□□ 1.3
RDH13Q8NBN7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
RDH13Q8NBN7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RDH13Q8NBN7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.16■■□□□ 1.3
RDH13Q8NBN7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.16■■□□□ 1.3
RDH13Q8NBN7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.16■■□□□ 1.3
RDH13Q8NBN7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RDH13Q8NBN7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RDH13Q8NBN7 AC244015.2-201ENST00000616358 1861 ntBASIC23.16■■□□□ 1.3
RDH13Q8NBN7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
RDH13Q8NBN7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.16■■□□□ 1.3
RDH13Q8NBN7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RDH13Q8NBN7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RDH13Q8NBN7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RDH13Q8NBN7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
RDH13Q8NBN7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.16■■□□□ 1.3
RDH13Q8NBN7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
RDH13Q8NBN7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RDH13Q8NBN7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RDH13Q8NBN7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RDH13Q8NBN7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.15■■□□□ 1.3
RDH13Q8NBN7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RDH13Q8NBN7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.15■■□□□ 1.3
RDH13Q8NBN7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RDH13Q8NBN7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RDH13Q8NBN7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RDH13Q8NBN7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RDH13Q8NBN7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.15■■□□□ 1.3
RDH13Q8NBN7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RDH13Q8NBN7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.15■■□□□ 1.3
RDH13Q8NBN7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.15■■□□□ 1.3
RDH13Q8NBN7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.15■■□□□ 1.3
RDH13Q8NBN7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.15■■□□□ 1.3
RDH13Q8NBN7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RDH13Q8NBN7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.15■■□□□ 1.3
RDH13Q8NBN7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.15■■□□□ 1.3
RDH13Q8NBN7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RDH13Q8NBN7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
RDH13Q8NBN7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.14■■□□□ 1.3
RDH13Q8NBN7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RDH13Q8NBN7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
RDH13Q8NBN7 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.14■■□□□ 1.29
RDH13Q8NBN7 TERF1P2-201ENST00000583350 1212 ntBASIC23.14■■□□□ 1.29
RDH13Q8NBN7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.14■■□□□ 1.29
RDH13Q8NBN7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.14■■□□□ 1.29
RDH13Q8NBN7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
RDH13Q8NBN7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.14■■□□□ 1.29
RDH13Q8NBN7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms