Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.6■□□□□ 0.41
CCDC71LQ8N9Z2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71LQ8N9Z2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71LQ8N9Z2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71LQ8N9Z2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC71LQ8N9Z2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC71LQ8N9Z2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71LQ8N9Z2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71LQ8N9Z2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC71LQ8N9Z2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC71LQ8N9Z2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71LQ8N9Z2 KRT125P-201ENST00000546827 989 ntBASIC17.6■□□□□ 0.41
CCDC71LQ8N9Z2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC71LQ8N9Z2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC71LQ8N9Z2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC71LQ8N9Z2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC71LQ8N9Z2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC71LQ8N9Z2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71LQ8N9Z2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71LQ8N9Z2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71LQ8N9Z2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71LQ8N9Z2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71LQ8N9Z2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71LQ8N9Z2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71LQ8N9Z2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71LQ8N9Z2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71LQ8N9Z2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC71LQ8N9Z2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC71LQ8N9Z2 AC087239.1-201ENST00000622671 572 ntBASIC17.59■□□□□ 0.41
CCDC71LQ8N9Z2 AC241377.3-202ENST00000626088 1088 ntBASIC17.59■□□□□ 0.41
CCDC71LQ8N9Z2 AC241585.3-202ENST00000628937 1088 ntBASIC17.59■□□□□ 0.41
CCDC71LQ8N9Z2 AC245100.8-202ENST00000629247 1058 ntBASIC17.59■□□□□ 0.41
CCDC71LQ8N9Z2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CCDC71LQ8N9Z2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CCDC71LQ8N9Z2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CCDC71LQ8N9Z2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CCDC71LQ8N9Z2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CCDC71LQ8N9Z2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.58■□□□□ 0.41
CCDC71LQ8N9Z2 AL049796.1-201ENST00000565336 1766 ntBASIC17.58■□□□□ 0.41
CCDC71LQ8N9Z2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC71LQ8N9Z2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC71LQ8N9Z2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CCDC71LQ8N9Z2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC71LQ8N9Z2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC71LQ8N9Z2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC71LQ8N9Z2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC71LQ8N9Z2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC71LQ8N9Z2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC71LQ8N9Z2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC71LQ8N9Z2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC71LQ8N9Z2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC71LQ8N9Z2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC71LQ8N9Z2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CCDC71LQ8N9Z2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC71LQ8N9Z2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC71LQ8N9Z2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC71LQ8N9Z2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC71LQ8N9Z2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC71LQ8N9Z2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71LQ8N9Z2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71LQ8N9Z2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71LQ8N9Z2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71LQ8N9Z2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71LQ8N9Z2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71LQ8N9Z2 AIRN-201ENST00000601203 4374 ntBASIC17.57■□□□□ 0.4
CCDC71LQ8N9Z2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC71LQ8N9Z2 AL034346.1-201ENST00000568244 1277 ntBASIC17.57■□□□□ 0.4
CCDC71LQ8N9Z2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71LQ8N9Z2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC71LQ8N9Z2 LINC01006-201ENST00000333319 2292 ntBASIC17.57■□□□□ 0.4
CCDC71LQ8N9Z2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC71LQ8N9Z2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71LQ8N9Z2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71LQ8N9Z2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71LQ8N9Z2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CCDC71LQ8N9Z2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71LQ8N9Z2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71LQ8N9Z2 AC133637.1-201ENST00000624115 1537 ntBASIC17.57■□□□□ 0.4
CCDC71LQ8N9Z2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC71LQ8N9Z2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC71LQ8N9Z2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC71LQ8N9Z2 AC092667.1-201ENST00000434301 2586 ntBASIC17.56■□□□□ 0.4
CCDC71LQ8N9Z2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC71LQ8N9Z2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC71LQ8N9Z2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CCDC71LQ8N9Z2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC71LQ8N9Z2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC71LQ8N9Z2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CCDC71LQ8N9Z2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC71LQ8N9Z2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCDC71LQ8N9Z2 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC71LQ8N9Z2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC71LQ8N9Z2 FEM1AP1-201ENST00000431297 1995 ntBASIC17.56■□□□□ 0.4
CCDC71LQ8N9Z2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC71LQ8N9Z2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC71LQ8N9Z2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC71LQ8N9Z2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC71LQ8N9Z2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC71LQ8N9Z2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC71LQ8N9Z2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms