Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
ABCA6Q8N139 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC31.89■■■□□ 2.7
ABCA6Q8N139 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC31.89■■■□□ 2.7
ABCA6Q8N139 AC060766.5-201ENST00000590539 871 ntBASIC31.89■■■□□ 2.7
ABCA6Q8N139 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC31.89■■■□□ 2.7
ABCA6Q8N139 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
ABCA6Q8N139 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
ABCA6Q8N139 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
ABCA6Q8N139 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
ABCA6Q8N139 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC31.88■■■□□ 2.69
ABCA6Q8N139 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC31.88■■■□□ 2.69
ABCA6Q8N139 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC31.88■■■□□ 2.69
ABCA6Q8N139 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC31.88■■■□□ 2.69
ABCA6Q8N139 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC31.88■■■□□ 2.69
ABCA6Q8N139 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
ABCA6Q8N139 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC31.87■■■□□ 2.69
ABCA6Q8N139 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
ABCA6Q8N139 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
ABCA6Q8N139 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
ABCA6Q8N139 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
ABCA6Q8N139 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC31.87■■■□□ 2.69
ABCA6Q8N139 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
ABCA6Q8N139 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
ABCA6Q8N139 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
ABCA6Q8N139 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
ABCA6Q8N139 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC31.86■■■□□ 2.69
ABCA6Q8N139 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
ABCA6Q8N139 CD44-222ENST00000526025 1052 ntTSL 2 BASIC31.86■■■□□ 2.69
ABCA6Q8N139 GATS-209ENST00000454084 1030 ntTSL 3 BASIC31.86■■■□□ 2.69
ABCA6Q8N139 RNF146-206ENST00000480444 843 ntTSL 2 BASIC31.86■■■□□ 2.69
ABCA6Q8N139 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC31.86■■■□□ 2.69
ABCA6Q8N139 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
ABCA6Q8N139 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC31.86■■■□□ 2.69
ABCA6Q8N139 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC31.86■■■□□ 2.69
ABCA6Q8N139 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC31.86■■■□□ 2.69
ABCA6Q8N139 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
ABCA6Q8N139 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC31.85■■■□□ 2.69
ABCA6Q8N139 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
ABCA6Q8N139 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC31.85■■■□□ 2.69
ABCA6Q8N139 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
ABCA6Q8N139 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
ABCA6Q8N139 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC31.85■■■□□ 2.69
ABCA6Q8N139 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
ABCA6Q8N139 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
ABCA6Q8N139 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC31.84■■■□□ 2.69
ABCA6Q8N139 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
ABCA6Q8N139 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC31.84■■■□□ 2.69
ABCA6Q8N139 AC008175.2-201ENST00000612840 297 ntBASIC31.84■■■□□ 2.69
ABCA6Q8N139 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC31.84■■■□□ 2.69
ABCA6Q8N139 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
ABCA6Q8N139 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
ABCA6Q8N139 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC31.84■■■□□ 2.69
ABCA6Q8N139 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
ABCA6Q8N139 UBE2SP1-201ENST00000450587 669 ntBASIC31.83■■■□□ 2.69
ABCA6Q8N139 AL591742.1-201ENST00000604433 565 ntBASIC31.83■■■□□ 2.69
ABCA6Q8N139 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
ABCA6Q8N139 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
ABCA6Q8N139 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
ABCA6Q8N139 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC31.82■■■□□ 2.69
ABCA6Q8N139 MIR4497-201ENST00000583208 89 ntBASIC31.82■■■□□ 2.69
ABCA6Q8N139 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC31.82■■■□□ 2.69
ABCA6Q8N139 AC120498.10-201ENST00000621827 505 ntBASIC31.82■■■□□ 2.69
ABCA6Q8N139 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
ABCA6Q8N139 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC31.82■■■□□ 2.68
ABCA6Q8N139 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC31.82■■■□□ 2.68
ABCA6Q8N139 AC073912.3-201ENST00000624414 853 ntBASIC31.82■■■□□ 2.68
ABCA6Q8N139 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC31.82■■■□□ 2.68
ABCA6Q8N139 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
ABCA6Q8N139 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
ABCA6Q8N139 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
ABCA6Q8N139 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
ABCA6Q8N139 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC31.81■■■□□ 2.68
ABCA6Q8N139 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC31.81■■■□□ 2.68
ABCA6Q8N139 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
ABCA6Q8N139 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC31.8■■■□□ 2.68
ABCA6Q8N139 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
ABCA6Q8N139 POU5F1P4-201ENST00000413175 1085 ntBASIC31.8■■■□□ 2.68
ABCA6Q8N139 AC233263.1-201ENST00000578059 224 ntBASIC31.8■■■□□ 2.68
ABCA6Q8N139 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
ABCA6Q8N139 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC31.8■■■□□ 2.68
ABCA6Q8N139 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC31.79■■■□□ 2.68
ABCA6Q8N139 ANOS2P-203ENST00000472227 1816 ntBASIC31.79■■■□□ 2.68
ABCA6Q8N139 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
ABCA6Q8N139 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
ABCA6Q8N139 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC31.79■■■□□ 2.68
ABCA6Q8N139 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
ABCA6Q8N139 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC31.79■■■□□ 2.68
ABCA6Q8N139 THRA-202ENST00000394121 2260 ntTSL 2 BASIC31.79■■■□□ 2.68
ABCA6Q8N139 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC31.79■■■□□ 2.68
ABCA6Q8N139 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC31.79■■■□□ 2.68
ABCA6Q8N139 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
ABCA6Q8N139 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC31.79■■■□□ 2.68
ABCA6Q8N139 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
ABCA6Q8N139 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
ABCA6Q8N139 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC31.78■■■□□ 2.68
ABCA6Q8N139 AL355472.2-201ENST00000422958 438 ntBASIC31.78■■■□□ 2.68
ABCA6Q8N139 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
ABCA6Q8N139 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC31.78■■■□□ 2.68
ABCA6Q8N139 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
ABCA6Q8N139 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms