Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.75■□□□□ 0.59
LINC00346Q8IVM7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.75■□□□□ 0.59
LINC00346Q8IVM7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
LINC00346Q8IVM7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00346Q8IVM7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.75■□□□□ 0.59
LINC00346Q8IVM7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00346Q8IVM7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.75■□□□□ 0.59
LINC00346Q8IVM7 AC106739.1-201ENST00000617035 715 ntBASIC18.75■□□□□ 0.59
LINC00346Q8IVM7 AC110285.6-201ENST00000617652 491 ntBASIC18.75■□□□□ 0.59
LINC00346Q8IVM7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
LINC00346Q8IVM7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
LINC00346Q8IVM7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00346Q8IVM7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00346Q8IVM7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00346Q8IVM7 AP006587.3-201ENST00000525742 1516 ntBASIC18.74■□□□□ 0.59
LINC00346Q8IVM7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.74■□□□□ 0.59
LINC00346Q8IVM7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00346Q8IVM7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
LINC00346Q8IVM7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00346Q8IVM7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.74■□□□□ 0.59
LINC00346Q8IVM7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00346Q8IVM7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.74■□□□□ 0.59
LINC00346Q8IVM7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00346Q8IVM7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00346Q8IVM7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00346Q8IVM7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00346Q8IVM7 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.74■□□□□ 0.59
LINC00346Q8IVM7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
LINC00346Q8IVM7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00346Q8IVM7 TSPY26P-201ENST00000476365 1326 ntBASIC18.74■□□□□ 0.59
LINC00346Q8IVM7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00346Q8IVM7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00346Q8IVM7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00346Q8IVM7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00346Q8IVM7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.73■□□□□ 0.59
LINC00346Q8IVM7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00346Q8IVM7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.73■□□□□ 0.59
LINC00346Q8IVM7 AP001330.3-201ENST00000520123 633 ntBASIC18.73■□□□□ 0.59
LINC00346Q8IVM7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.73■□□□□ 0.59
LINC00346Q8IVM7 AC027682.1-201ENST00000562846 899 ntBASIC18.73■□□□□ 0.59
LINC00346Q8IVM7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.73■□□□□ 0.59
LINC00346Q8IVM7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00346Q8IVM7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00346Q8IVM7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00346Q8IVM7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00346Q8IVM7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00346Q8IVM7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.73■□□□□ 0.59
LINC00346Q8IVM7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.73■□□□□ 0.59
LINC00346Q8IVM7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.73■□□□□ 0.59
LINC00346Q8IVM7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
LINC00346Q8IVM7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00346Q8IVM7 AL024507.2-201ENST00000606070 2574 ntBASIC18.72■□□□□ 0.59
LINC00346Q8IVM7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00346Q8IVM7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00346Q8IVM7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00346Q8IVM7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.72■□□□□ 0.59
LINC00346Q8IVM7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.72■□□□□ 0.59
LINC00346Q8IVM7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.72■□□□□ 0.59
LINC00346Q8IVM7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00346Q8IVM7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00346Q8IVM7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00346Q8IVM7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00346Q8IVM7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00346Q8IVM7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LINC00346Q8IVM7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.71■□□□□ 0.59
LINC00346Q8IVM7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00346Q8IVM7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LINC00346Q8IVM7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00346Q8IVM7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.71■□□□□ 0.59
LINC00346Q8IVM7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00346Q8IVM7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00346Q8IVM7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.71■□□□□ 0.59
LINC00346Q8IVM7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.71■□□□□ 0.59
LINC00346Q8IVM7 AF213884.3-201ENST00000563833 479 ntBASIC18.71■□□□□ 0.59
LINC00346Q8IVM7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.71■□□□□ 0.59
LINC00346Q8IVM7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.71■□□□□ 0.59
LINC00346Q8IVM7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00346Q8IVM7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00346Q8IVM7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00346Q8IVM7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
LINC00346Q8IVM7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00346Q8IVM7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00346Q8IVM7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00346Q8IVM7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00346Q8IVM7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.7■□□□□ 0.58
LINC00346Q8IVM7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00346Q8IVM7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
LINC00346Q8IVM7 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.7■□□□□ 0.58
LINC00346Q8IVM7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00346Q8IVM7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00346Q8IVM7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00346Q8IVM7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00346Q8IVM7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.7■□□□□ 0.58
LINC00346Q8IVM7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00346Q8IVM7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.69■□□□□ 0.58
LINC00346Q8IVM7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00346Q8IVM7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00346Q8IVM7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00346Q8IVM7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00346Q8IVM7 EDA-201ENST00000338901 1233 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms