Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.09■□□□□ 0.97
CRLF3Q8IUI8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.09■□□□□ 0.97
CRLF3Q8IUI8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CRLF3Q8IUI8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CRLF3Q8IUI8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.09■□□□□ 0.97
CRLF3Q8IUI8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.09■□□□□ 0.97
CRLF3Q8IUI8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.09■□□□□ 0.97
CRLF3Q8IUI8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.09■□□□□ 0.97
CRLF3Q8IUI8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CRLF3Q8IUI8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.09■□□□□ 0.97
CRLF3Q8IUI8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CRLF3Q8IUI8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CRLF3Q8IUI8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CRLF3Q8IUI8 AC026471.6-201ENST00000622954 1905 ntBASIC21.08■□□□□ 0.97
CRLF3Q8IUI8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CRLF3Q8IUI8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.08■□□□□ 0.97
CRLF3Q8IUI8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.08■□□□□ 0.97
CRLF3Q8IUI8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.08■□□□□ 0.97
CRLF3Q8IUI8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CRLF3Q8IUI8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CRLF3Q8IUI8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CRLF3Q8IUI8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.08■□□□□ 0.96
CRLF3Q8IUI8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.07■□□□□ 0.96
CRLF3Q8IUI8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
CRLF3Q8IUI8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CRLF3Q8IUI8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.07■□□□□ 0.96
CRLF3Q8IUI8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CRLF3Q8IUI8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CRLF3Q8IUI8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CRLF3Q8IUI8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CRLF3Q8IUI8 C17orf82-201ENST00000623772 1530 ntBASIC21.07■□□□□ 0.96
CRLF3Q8IUI8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CRLF3Q8IUI8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CRLF3Q8IUI8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CRLF3Q8IUI8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
CRLF3Q8IUI8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CRLF3Q8IUI8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CRLF3Q8IUI8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRLF3Q8IUI8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRLF3Q8IUI8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CRLF3Q8IUI8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRLF3Q8IUI8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRLF3Q8IUI8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRLF3Q8IUI8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CRLF3Q8IUI8 AC079089.2-201ENST00000531211 1277 ntBASIC21.06■□□□□ 0.96
CRLF3Q8IUI8 AL121603.2-201ENST00000557373 2117 ntBASIC21.06■□□□□ 0.96
CRLF3Q8IUI8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.06■□□□□ 0.96
CRLF3Q8IUI8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRLF3Q8IUI8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CRLF3Q8IUI8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRLF3Q8IUI8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.06■□□□□ 0.96
CRLF3Q8IUI8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 UNC93B3-201ENST00000308076 687 ntBASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 AC092667.1-201ENST00000434301 2586 ntBASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CRLF3Q8IUI8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.04■□□□□ 0.96
CRLF3Q8IUI8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CRLF3Q8IUI8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CRLF3Q8IUI8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CRLF3Q8IUI8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CRLF3Q8IUI8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.04■□□□□ 0.96
CRLF3Q8IUI8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CRLF3Q8IUI8 AL499627.2-201ENST00000606283 725 ntBASIC21.04■□□□□ 0.96
CRLF3Q8IUI8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CRLF3Q8IUI8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CRLF3Q8IUI8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CRLF3Q8IUI8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CRLF3Q8IUI8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CRLF3Q8IUI8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CRLF3Q8IUI8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CRLF3Q8IUI8 OXCT2P1-201ENST00000447263 1535 ntBASIC21.04■□□□□ 0.96
CRLF3Q8IUI8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CRLF3Q8IUI8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CRLF3Q8IUI8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CRLF3Q8IUI8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CRLF3Q8IUI8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.03■□□□□ 0.96
CRLF3Q8IUI8 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CRLF3Q8IUI8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms