Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST2H3AQ71DI3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HIST2H3AQ71DI3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HIST2H3AQ71DI3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.62■□□□□ 0.57
HIST2H3AQ71DI3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST2H3AQ71DI3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.62■□□□□ 0.57
HIST2H3AQ71DI3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HIST2H3AQ71DI3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HIST2H3AQ71DI3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST2H3AQ71DI3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HIST2H3AQ71DI3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HIST2H3AQ71DI3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.61■□□□□ 0.57
HIST2H3AQ71DI3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST2H3AQ71DI3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST2H3AQ71DI3 AC055733.4-201ENST00000638462 1354 ntBASIC18.61■□□□□ 0.57
HIST2H3AQ71DI3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST2H3AQ71DI3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
HIST2H3AQ71DI3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.61■□□□□ 0.57
HIST2H3AQ71DI3 AC012414.1-201ENST00000556676 535 ntBASIC18.61■□□□□ 0.57
HIST2H3AQ71DI3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.61■□□□□ 0.57
HIST2H3AQ71DI3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST2H3AQ71DI3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.6■□□□□ 0.57
HIST2H3AQ71DI3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST2H3AQ71DI3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
HIST2H3AQ71DI3 BX005040.4-201ENST00000637145 1518 ntBASIC18.6■□□□□ 0.57
HIST2H3AQ71DI3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HIST2H3AQ71DI3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HIST2H3AQ71DI3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST2H3AQ71DI3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
HIST2H3AQ71DI3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST2H3AQ71DI3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HIST2H3AQ71DI3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST2H3AQ71DI3 AC005837.3-201ENST00000612163 286 ntBASIC18.6■□□□□ 0.57
HIST2H3AQ71DI3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST2H3AQ71DI3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST2H3AQ71DI3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST2H3AQ71DI3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.6■□□□□ 0.57
HIST2H3AQ71DI3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 AC005224.4-201ENST00000583262 1652 ntBASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST2H3AQ71DI3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HIST2H3AQ71DI3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.58■□□□□ 0.57
HIST2H3AQ71DI3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.58■□□□□ 0.57
HIST2H3AQ71DI3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HIST2H3AQ71DI3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HIST2H3AQ71DI3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.58■□□□□ 0.56
HIST2H3AQ71DI3 AC142381.2-201ENST00000566120 298 ntBASIC18.58■□□□□ 0.56
HIST2H3AQ71DI3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.58■□□□□ 0.56
HIST2H3AQ71DI3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
HIST2H3AQ71DI3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.58■□□□□ 0.56
HIST2H3AQ71DI3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST2H3AQ71DI3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST2H3AQ71DI3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIST2H3AQ71DI3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.57■□□□□ 0.56
HIST2H3AQ71DI3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST2H3AQ71DI3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.57■□□□□ 0.56
HIST2H3AQ71DI3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST2H3AQ71DI3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIST2H3AQ71DI3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.57■□□□□ 0.56
HIST2H3AQ71DI3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.57■□□□□ 0.56
HIST2H3AQ71DI3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.57■□□□□ 0.56
HIST2H3AQ71DI3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.57■□□□□ 0.56
HIST2H3AQ71DI3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST2H3AQ71DI3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST2H3AQ71DI3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIST2H3AQ71DI3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.57■□□□□ 0.56
HIST2H3AQ71DI3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST2H3AQ71DI3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
HIST2H3AQ71DI3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
HIST2H3AQ71DI3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HIST2H3AQ71DI3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
HIST2H3AQ71DI3 SLC25A24-204ENST00000569674 2357 ntBASIC18.56■□□□□ 0.56
HIST2H3AQ71DI3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
HIST2H3AQ71DI3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
HIST2H3AQ71DI3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIST2H3AQ71DI3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIST2H3AQ71DI3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIST2H3AQ71DI3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.56■□□□□ 0.56
HIST2H3AQ71DI3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms